Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL3Q8N8U3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL3Q8N8U3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL3Q8N8U3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL3Q8N8U3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL3Q8N8U3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL3Q8N8U3 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
RTL3Q8N8U3 UBALD1-205ENST00000590891 2641 ntBASIC17.15■□□□□ 0.34
RTL3Q8N8U3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.15■□□□□ 0.34
RTL3Q8N8U3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.15■□□□□ 0.34
RTL3Q8N8U3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTL3Q8N8U3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RTL3Q8N8U3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RTL3Q8N8U3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RTL3Q8N8U3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.14■□□□□ 0.33
RTL3Q8N8U3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTL3Q8N8U3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RTL3Q8N8U3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.14■□□□□ 0.33
RTL3Q8N8U3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTL3Q8N8U3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RTL3Q8N8U3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTL3Q8N8U3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTL3Q8N8U3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.14■□□□□ 0.33
RTL3Q8N8U3 AC021097.1-201ENST00000607902 574 ntBASIC17.14■□□□□ 0.33
RTL3Q8N8U3 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RTL3Q8N8U3 AC092171.3-201ENST00000610122 2651 ntBASIC17.14■□□□□ 0.33
RTL3Q8N8U3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RTL3Q8N8U3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTL3Q8N8U3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.14■□□□□ 0.33
RTL3Q8N8U3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RTL3Q8N8U3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTL3Q8N8U3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
RTL3Q8N8U3 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.14■□□□□ 0.33
RTL3Q8N8U3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTL3Q8N8U3 AL031731.1-201ENST00000642131 2094 ntBASIC17.14■□□□□ 0.33
RTL3Q8N8U3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTL3Q8N8U3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTL3Q8N8U3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RTL3Q8N8U3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.13■□□□□ 0.33
RTL3Q8N8U3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 YBX2P1-201ENST00000394192 760 ntBASIC17.12■□□□□ 0.33
RTL3Q8N8U3 AC092474.2-201ENST00000424288 719 ntBASIC17.12■□□□□ 0.33
RTL3Q8N8U3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 MTDHP5-201ENST00000598980 586 ntBASIC17.12■□□□□ 0.33
RTL3Q8N8U3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 GGT4P-201ENST00000623672 1708 ntBASIC17.12■□□□□ 0.33
RTL3Q8N8U3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.12■□□□□ 0.33
RTL3Q8N8U3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms