Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIML2Q8N7C3 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIML2Q8N7C3 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIML2Q8N7C3 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIML2Q8N7C3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIML2Q8N7C3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIML2Q8N7C3 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIML2Q8N7C3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIML2Q8N7C3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIML2Q8N7C3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
TRIML2Q8N7C3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIML2Q8N7C3 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TRIML2Q8N7C3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIML2Q8N7C3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIML2Q8N7C3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIML2Q8N7C3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIML2Q8N7C3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIML2Q8N7C3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIML2Q8N7C3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIML2Q8N7C3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIML2Q8N7C3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIML2Q8N7C3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIML2Q8N7C3 Z69720.1-201ENST00000601483 472 ntBASIC16.27■□□□□ 0.2
TRIML2Q8N7C3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIML2Q8N7C3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRIML2Q8N7C3 GPR89P-201ENST00000407924 1495 ntBASIC16.27■□□□□ 0.19
TRIML2Q8N7C3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIML2Q8N7C3 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIML2Q8N7C3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIML2Q8N7C3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.27■□□□□ 0.19
TRIML2Q8N7C3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.27■□□□□ 0.19
TRIML2Q8N7C3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIML2Q8N7C3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 AL031133.1-201ENST00000406807 723 ntBASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 AD001527.2-201ENST00000622994 785 ntBASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIML2Q8N7C3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIML2Q8N7C3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIML2Q8N7C3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIML2Q8N7C3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
TRIML2Q8N7C3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIML2Q8N7C3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIML2Q8N7C3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIML2Q8N7C3 RNF216P1-203ENST00000404404 2427 ntBASIC16.25■□□□□ 0.19
TRIML2Q8N7C3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIML2Q8N7C3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIML2Q8N7C3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIML2Q8N7C3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIML2Q8N7C3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIML2Q8N7C3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIML2Q8N7C3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIML2Q8N7C3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms