Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDKL1Q00532 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.51■□□□□ 0.23
CDKL1Q00532 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CDKL1Q00532 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.51■□□□□ 0.23
CDKL1Q00532 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKL1Q00532 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKL1Q00532 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CDKL1Q00532 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKL1Q00532 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDKL1Q00532 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKL1Q00532 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDKL1Q00532 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CDKL1Q00532 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.51■□□□□ 0.23
CDKL1Q00532 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKL1Q00532 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.51■□□□□ 0.23
CDKL1Q00532 RPS2P1-201ENST00000434010 821 ntBASIC16.51■□□□□ 0.23
CDKL1Q00532 HLA-J-202ENST00000469281 1241 ntBASIC16.51■□□□□ 0.23
CDKL1Q00532 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDKL1Q00532 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.51■□□□□ 0.23
CDKL1Q00532 GGTLC5P-201ENST00000617623 998 ntBASIC16.51■□□□□ 0.23
CDKL1Q00532 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.51■□□□□ 0.23
CDKL1Q00532 AC008735.5-201ENST00000623544 497 ntBASIC16.51■□□□□ 0.23
CDKL1Q00532 TP73-AS1-207ENST00000624167 988 ntBASIC16.51■□□□□ 0.23
CDKL1Q00532 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.51■□□□□ 0.23
CDKL1Q00532 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CDKL1Q00532 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKL1Q00532 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDKL1Q00532 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKL1Q00532 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.51■□□□□ 0.23
CDKL1Q00532 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDKL1Q00532 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKL1Q00532 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKL1Q00532 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKL1Q00532 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.51■□□□□ 0.23
CDKL1Q00532 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDKL1Q00532 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CDKL1Q00532 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDKL1Q00532 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDKL1Q00532 AC002310.6-201ENST00000624451 1377 ntBASIC16.51■□□□□ 0.23
CDKL1Q00532 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKL1Q00532 PI4KAP1-204ENST00000612579 1703 ntBASIC16.5■□□□□ 0.23
CDKL1Q00532 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDKL1Q00532 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKL1Q00532 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDKL1Q00532 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKL1Q00532 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKL1Q00532 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDKL1Q00532 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDKL1Q00532 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CDKL1Q00532 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKL1Q00532 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKL1Q00532 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKL1Q00532 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKL1Q00532 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CDKL1Q00532 AC006277.1-201ENST00000624348 1610 ntBASIC16.5■□□□□ 0.23
CDKL1Q00532 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKL1Q00532 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKL1Q00532 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDKL1Q00532 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.5■□□□□ 0.23
CDKL1Q00532 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.5■□□□□ 0.23
CDKL1Q00532 FAAHP1-202ENST00000446499 1238 ntBASIC16.5■□□□□ 0.23
CDKL1Q00532 FAM197Y8-203ENST00000450145 560 ntBASIC16.5■□□□□ 0.23
CDKL1Q00532 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.5■□□□□ 0.23
CDKL1Q00532 AC136632.2-201ENST00000512891 861 ntBASIC16.5■□□□□ 0.23
CDKL1Q00532 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.5■□□□□ 0.23
CDKL1Q00532 REXO1L3P-201ENST00000622202 1288 ntBASIC16.5■□□□□ 0.23
CDKL1Q00532 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKL1Q00532 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
CDKL1Q00532 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.5■□□□□ 0.23
CDKL1Q00532 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKL1Q00532 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKL1Q00532 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDKL1Q00532 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CDKL1Q00532 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.5■□□□□ 0.23
CDKL1Q00532 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.5■□□□□ 0.23
CDKL1Q00532 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CDKL1Q00532 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDKL1Q00532 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CDKL1Q00532 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.5■□□□□ 0.23
CDKL1Q00532 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDKL1Q00532 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDKL1Q00532 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CDKL1Q00532 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKL1Q00532 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKL1Q00532 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.49■□□□□ 0.23
CDKL1Q00532 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKL1Q00532 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKL1Q00532 RPS2P28-201ENST00000314255 741 ntBASIC16.49■□□□□ 0.23
CDKL1Q00532 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDKL1Q00532 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.49■□□□□ 0.23
CDKL1Q00532 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CDKL1Q00532 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.49■□□□□ 0.23
CDKL1Q00532 AL513523.2-202ENST00000427283 2040 ntBASIC16.49■□□□□ 0.23
CDKL1Q00532 KRT18P67-201ENST00000432816 1264 ntBASIC16.49■□□□□ 0.23
CDKL1Q00532 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CDKL1Q00532 AF186996.4-201ENST00000467186 377 ntBASIC16.49■□□□□ 0.23
CDKL1Q00532 RPS15P9-201ENST00000494093 319 ntBASIC16.49■□□□□ 0.23
CDKL1Q00532 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.49■□□□□ 0.23
CDKL1Q00532 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.49■□□□□ 0.23
CDKL1Q00532 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms