Protein–RNA interactions for Protein: P57768

SNX16, Sorting nexin-16, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16P57768 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX16P57768 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX16P57768 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX16P57768 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX16P57768 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.68■□□□□ 0.42
SNX16P57768 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.68■□□□□ 0.42
SNX16P57768 AC106730.1-201ENST00000566722 1090 ntBASIC17.68■□□□□ 0.42
SNX16P57768 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX16P57768 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX16P57768 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX16P57768 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX16P57768 AL603756.1-201ENST00000606511 2163 ntBASIC17.68■□□□□ 0.42
SNX16P57768 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.68■□□□□ 0.42
SNX16P57768 AC027601.4-201ENST00000611259 610 ntBASIC17.68■□□□□ 0.42
SNX16P57768 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SNX16P57768 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX16P57768 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX16P57768 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNX16P57768 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX16P57768 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.68■□□□□ 0.42
SNX16P57768 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SNX16P57768 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX16P57768 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SNX16P57768 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX16P57768 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SNX16P57768 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SNX16P57768 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX16P57768 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
SNX16P57768 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX16P57768 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX16P57768 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.67■□□□□ 0.42
SNX16P57768 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.67■□□□□ 0.42
SNX16P57768 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX16P57768 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX16P57768 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX16P57768 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SNX16P57768 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX16P57768 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SNX16P57768 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX16P57768 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SNX16P57768 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.67■□□□□ 0.42
SNX16P57768 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX16P57768 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.67■□□□□ 0.42
SNX16P57768 RNA5SP416-201ENST00000516838 111 ntBASIC17.67■□□□□ 0.42
SNX16P57768 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.67■□□□□ 0.42
SNX16P57768 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX16P57768 AC064836.3-201ENST00000607928 673 ntBASIC17.67■□□□□ 0.42
SNX16P57768 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.67■□□□□ 0.42
SNX16P57768 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.67■□□□□ 0.42
SNX16P57768 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.67■□□□□ 0.42
SNX16P57768 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX16P57768 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
SNX16P57768 AC011676.5-201ENST00000624864 2660 ntBASIC17.67■□□□□ 0.42
SNX16P57768 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
SNX16P57768 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX16P57768 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX16P57768 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX16P57768 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX16P57768 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX16P57768 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SNX16P57768 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SNX16P57768 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.67■□□□□ 0.42
SNX16P57768 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SNX16P57768 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SNX16P57768 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNX16P57768 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SNX16P57768 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX16P57768 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SNX16P57768 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SNX16P57768 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.66■□□□□ 0.42
SNX16P57768 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX16P57768 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX16P57768 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX16P57768 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNX16P57768 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.66■□□□□ 0.42
SNX16P57768 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.66■□□□□ 0.42
SNX16P57768 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX16P57768 FAM197Y3-203ENST00000618346 717 ntBASIC17.66■□□□□ 0.42
SNX16P57768 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX16P57768 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX16P57768 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX16P57768 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX16P57768 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SNX16P57768 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX16P57768 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX16P57768 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
SNX16P57768 AC009053.2-201ENST00000563701 2365 ntBASIC17.66■□□□□ 0.42
SNX16P57768 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX16P57768 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.66■□□□□ 0.42
SNX16P57768 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX16P57768 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SNX16P57768 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
SNX16P57768 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX16P57768 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.65■□□□□ 0.42
SNX16P57768 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX16P57768 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX16P57768 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
SNX16P57768 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.65■□□□□ 0.42
SNX16P57768 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SNX16P57768 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms