Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATP1B3P54709 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.59□□□□□ -0.07
ATP1B3P54709 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATP1B3P54709 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
ATP1B3P54709 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATP1B3P54709 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATP1B3P54709 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
ATP1B3P54709 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATP1B3P54709 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
ATP1B3P54709 ARMC10P1-201ENST00000313754 855 ntBASIC14.59□□□□□ -0.07
ATP1B3P54709 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATP1B3P54709 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.59□□□□□ -0.07
ATP1B3P54709 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATP1B3P54709 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.59□□□□□ -0.07
ATP1B3P54709 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
ATP1B3P54709 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.59□□□□□ -0.07
ATP1B3P54709 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.59□□□□□ -0.07
ATP1B3P54709 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.59□□□□□ -0.07
ATP1B3P54709 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.59□□□□□ -0.07
ATP1B3P54709 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.59□□□□□ -0.07
ATP1B3P54709 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATP1B3P54709 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ATP1B3P54709 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATP1B3P54709 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATP1B3P54709 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATP1B3P54709 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATP1B3P54709 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
ATP1B3P54709 AC068587.6-202ENST00000641839 5619 ntBASIC14.59□□□□□ -0.07
ATP1B3P54709 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATP1B3P54709 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.59□□□□□ -0.07
ATP1B3P54709 AC063926.3-201ENST00000624734 5658 ntBASIC14.59□□□□□ -0.07
ATP1B3P54709 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.59□□□□□ -0.07
ATP1B3P54709 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.59□□□□□ -0.07
ATP1B3P54709 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATP1B3P54709 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATP1B3P54709 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATP1B3P54709 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.59□□□□□ -0.07
ATP1B3P54709 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATP1B3P54709 AC004817.3-201ENST00000602957 2129 ntBASIC14.59□□□□□ -0.07
ATP1B3P54709 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATP1B3P54709 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ATP1B3P54709 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.58□□□□□ -0.07
ATP1B3P54709 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.58□□□□□ -0.07
ATP1B3P54709 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ATP1B3P54709 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ATP1B3P54709 AP005117.1-201ENST00000584346 1413 ntBASIC14.58□□□□□ -0.07
ATP1B3P54709 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATP1B3P54709 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATP1B3P54709 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
ATP1B3P54709 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATP1B3P54709 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ATP1B3P54709 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATP1B3P54709 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATP1B3P54709 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.58□□□□□ -0.08
ATP1B3P54709 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.58□□□□□ -0.08
ATP1B3P54709 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.58□□□□□ -0.08
ATP1B3P54709 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATP1B3P54709 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATP1B3P54709 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATP1B3P54709 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.58□□□□□ -0.08
ATP1B3P54709 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATP1B3P54709 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATP1B3P54709 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.58□□□□□ -0.08
ATP1B3P54709 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ATP1B3P54709 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATP1B3P54709 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
ATP1B3P54709 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATP1B3P54709 KRT18P35-201ENST00000510488 1269 ntBASIC14.58□□□□□ -0.08
ATP1B3P54709 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATP1B3P54709 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATP1B3P54709 AC138894.3-201ENST00000603787 634 ntBASIC14.58□□□□□ -0.08
ATP1B3P54709 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.58□□□□□ -0.08
ATP1B3P54709 AC093458.2-201ENST00000623150 629 ntBASIC14.58□□□□□ -0.08
ATP1B3P54709 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ATP1B3P54709 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATP1B3P54709 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATP1B3P54709 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATP1B3P54709 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATP1B3P54709 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATP1B3P54709 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATP1B3P54709 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATP1B3P54709 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATP1B3P54709 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ATP1B3P54709 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
ATP1B3P54709 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
ATP1B3P54709 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.58□□□□□ -0.08
ATP1B3P54709 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.58□□□□□ -0.08
ATP1B3P54709 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.58□□□□□ -0.08
ATP1B3P54709 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ATP1B3P54709 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
ATP1B3P54709 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATP1B3P54709 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATP1B3P54709 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATP1B3P54709 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
ATP1B3P54709 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATP1B3P54709 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATP1B3P54709 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATP1B3P54709 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ATP1B3P54709 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ATP1B3P54709 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms