Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC11.33□□□□□ -0.6
PCP4P48539 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 LINC00538-201ENST00000626109 1906 ntBASIC11.33□□□□□ -0.6
PCP4P48539 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
PCP4P48539 NLGN3-205ENST00000536169 3863 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
PCP4P48539 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
PCP4P48539 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 AP001271.2-201ENST00000624018 1556 ntBASIC11.33□□□□□ -0.6
PCP4P48539 MTHFR-217ENST00000641820 1569 ntBASIC11.33□□□□□ -0.6
PCP4P48539 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
PCP4P48539 AC012531.1-201ENST00000562848 2680 ntBASIC11.32□□□□□ -0.6
PCP4P48539 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PCP4P48539 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC11.32□□□□□ -0.6
PCP4P48539 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
PCP4P48539 RAB27A-201ENST00000336787 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PCP4P48539 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC11.32□□□□□ -0.6
PCP4P48539 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC11.32□□□□□ -0.6
PCP4P48539 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PCP4P48539 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PCP4P48539 IL36RN-202ENST00000393200 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PCP4P48539 MAPK10-262ENST00000641051 5738 ntBASIC11.32□□□□□ -0.6
PCP4P48539 AL645728.1-201ENST00000366221 2101 ntBASIC11.32□□□□□ -0.6
PCP4P48539 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC11.32□□□□□ -0.6
PCP4P48539 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC11.32□□□□□ -0.6
PCP4P48539 FGF11-202ENST00000572907 2358 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PCP4P48539 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC11.32□□□□□ -0.6
PCP4P48539 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PCP4P48539 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC11.32□□□□□ -0.6
PCP4P48539 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
PCP4P48539 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PCP4P48539 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PCP4P48539 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PCP4P48539 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PCP4P48539 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
PCP4P48539 FAM156B-203ENST00000593751 2942 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
PCP4P48539 FAM156A-201ENST00000596733 2942 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
PCP4P48539 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
PCP4P48539 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PCP4P48539 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
PCP4P48539 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PCP4P48539 CICP18-201ENST00000406017 2812 ntBASIC11.32□□□□□ -0.6
PCP4P48539 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PCP4P48539 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
PCP4P48539 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
PCP4P48539 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC11.32□□□□□ -0.6
PCP4P48539 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC11.32□□□□□ -0.6
PCP4P48539 FAIM2-205ENST00000550890 2094 ntTSL 2 BASIC11.32□□□□□ -0.6
PCP4P48539 EYA3-202ENST00000373864 2459 ntTSL 5 BASIC11.32□□□□□ -0.6
PCP4P48539 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
PCP4P48539 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PCP4P48539 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC11.32□□□□□ -0.6
PCP4P48539 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
PCP4P48539 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PCP4P48539 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PCP4P48539 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC11.32□□□□□ -0.6
PCP4P48539 WARS-232ENST00000556645 2508 ntTSL 5 BASIC11.32□□□□□ -0.6
PCP4P48539 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC11.32□□□□□ -0.6
PCP4P48539 SLC37A2-201ENST00000308074 2696 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
PCP4P48539 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
PCP4P48539 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
PCP4P48539 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC11.31□□□□□ -0.6
PCP4P48539 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC11.31□□□□□ -0.6
PCP4P48539 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
PCP4P48539 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 TMEM8B-201ENST00000377988 3731 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
PCP4P48539 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC11.31□□□□□ -0.6
PCP4P48539 HERC2P9-203ENST00000528584 2947 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC11.31□□□□□ -0.6
PCP4P48539 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 RUNX1T1-227ENST00000520724 2103 ntTSL 2 BASIC11.31□□□□□ -0.6
PCP4P48539 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 RGL4-201ENST00000290691 2885 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
PCP4P48539 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
PCP4P48539 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms