Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CBX5P45973 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CBX5P45973 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CBX5P45973 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CBX5P45973 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CBX5P45973 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CBX5P45973 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CBX5P45973 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.5□□□□□ -0.09
CBX5P45973 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.5□□□□□ -0.09
CBX5P45973 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CBX5P45973 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CBX5P45973 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.5□□□□□ -0.09
CBX5P45973 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CBX5P45973 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CBX5P45973 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CBX5P45973 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.5□□□□□ -0.09
CBX5P45973 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CBX5P45973 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.5□□□□□ -0.09
CBX5P45973 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CBX5P45973 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC14.5□□□□□ -0.09
CBX5P45973 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CBX5P45973 MIR662-201ENST00000384847 95 ntBASIC14.5□□□□□ -0.09
CBX5P45973 STARP1-201ENST00000397973 869 ntBASIC14.5□□□□□ -0.09
CBX5P45973 AC007967.3-201ENST00000434308 558 ntBASIC14.5□□□□□ -0.09
CBX5P45973 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.5□□□□□ -0.09
CBX5P45973 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CBX5P45973 SNORA78-201ENST00000459373 127 ntBASIC14.5□□□□□ -0.09
CBX5P45973 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.5□□□□□ -0.09
CBX5P45973 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CBX5P45973 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.5□□□□□ -0.09
CBX5P45973 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.5□□□□□ -0.09
CBX5P45973 AL138966.2-201ENST00000621997 464 ntBASIC14.5□□□□□ -0.09
CBX5P45973 AL023973.1-201ENST00000624619 620 ntBASIC14.5□□□□□ -0.09
CBX5P45973 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CBX5P45973 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
CBX5P45973 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CBX5P45973 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CBX5P45973 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CBX5P45973 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CBX5P45973 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.5□□□□□ -0.09
CBX5P45973 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CBX5P45973 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CBX5P45973 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
CBX5P45973 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CBX5P45973 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.5□□□□□ -0.09
CBX5P45973 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.5□□□□□ -0.09
CBX5P45973 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CBX5P45973 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CBX5P45973 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CBX5P45973 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CBX5P45973 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.49□□□□□ -0.09
CBX5P45973 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CBX5P45973 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CBX5P45973 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
CBX5P45973 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
CBX5P45973 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CBX5P45973 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
CBX5P45973 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CBX5P45973 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CBX5P45973 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CBX5P45973 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
CBX5P45973 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CBX5P45973 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CBX5P45973 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CBX5P45973 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.49□□□□□ -0.09
CBX5P45973 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CBX5P45973 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.49□□□□□ -0.09
CBX5P45973 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.49□□□□□ -0.09
CBX5P45973 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.49□□□□□ -0.09
CBX5P45973 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CBX5P45973 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CBX5P45973 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.49□□□□□ -0.09
CBX5P45973 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.49□□□□□ -0.09
CBX5P45973 STK25P1-201ENST00000585406 838 ntBASIC14.49□□□□□ -0.09
CBX5P45973 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.49□□□□□ -0.09
CBX5P45973 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.49□□□□□ -0.09
CBX5P45973 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CBX5P45973 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.49□□□□□ -0.09
CBX5P45973 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.49□□□□□ -0.09
CBX5P45973 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CBX5P45973 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.49□□□□□ -0.09
CBX5P45973 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CBX5P45973 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CBX5P45973 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CBX5P45973 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.49□□□□□ -0.09
CBX5P45973 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.49□□□□□ -0.09
CBX5P45973 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CBX5P45973 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
CBX5P45973 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CBX5P45973 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
CBX5P45973 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.49□□□□□ -0.09
CBX5P45973 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CBX5P45973 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CBX5P45973 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CBX5P45973 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.48□□□□□ -0.09
CBX5P45973 LINC01568-207ENST00000641790 1380 ntBASIC14.48□□□□□ -0.09
CBX5P45973 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CBX5P45973 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms