Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
THBS1P07996 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
THBS1P07996 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
THBS1P07996 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
THBS1P07996 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.42■□□□□ 0.06
THBS1P07996 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
THBS1P07996 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.42■□□□□ 0.06
THBS1P07996 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
THBS1P07996 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.42■□□□□ 0.06
THBS1P07996 KRT18P67-201ENST00000432816 1264 ntBASIC15.42■□□□□ 0.06
THBS1P07996 FAM197Y8-203ENST00000450145 560 ntBASIC15.42■□□□□ 0.06
THBS1P07996 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.42■□□□□ 0.06
THBS1P07996 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.42■□□□□ 0.06
THBS1P07996 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.42■□□□□ 0.06
THBS1P07996 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.42■□□□□ 0.06
THBS1P07996 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.42■□□□□ 0.06
THBS1P07996 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.42■□□□□ 0.06
THBS1P07996 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.42■□□□□ 0.06
THBS1P07996 AL356488.2-201ENST00000602755 427 ntBASIC15.42■□□□□ 0.06
THBS1P07996 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
THBS1P07996 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
THBS1P07996 TP73-AS1-207ENST00000624167 988 ntBASIC15.42■□□□□ 0.06
THBS1P07996 AL513523.2-202ENST00000427283 2040 ntBASIC15.42■□□□□ 0.06
THBS1P07996 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
THBS1P07996 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
THBS1P07996 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.42■□□□□ 0.06
THBS1P07996 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
THBS1P07996 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
THBS1P07996 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
THBS1P07996 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
THBS1P07996 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
THBS1P07996 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.42■□□□□ 0.06
THBS1P07996 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
THBS1P07996 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.42■□□□□ 0.06
THBS1P07996 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
THBS1P07996 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
THBS1P07996 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.42■□□□□ 0.06
THBS1P07996 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.42■□□□□ 0.06
THBS1P07996 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
THBS1P07996 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.42■□□□□ 0.06
THBS1P07996 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.42■□□□□ 0.06
THBS1P07996 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
THBS1P07996 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
THBS1P07996 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
THBS1P07996 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.41■□□□□ 0.06
THBS1P07996 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.41■□□□□ 0.06
THBS1P07996 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
THBS1P07996 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.41■□□□□ 0.06
THBS1P07996 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
THBS1P07996 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
THBS1P07996 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.41■□□□□ 0.06
THBS1P07996 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.41■□□□□ 0.06
THBS1P07996 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
THBS1P07996 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
THBS1P07996 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.41■□□□□ 0.06
THBS1P07996 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.41■□□□□ 0.06
THBS1P07996 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.41■□□□□ 0.06
THBS1P07996 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.41■□□□□ 0.06
THBS1P07996 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.41■□□□□ 0.06
THBS1P07996 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 AC005593.1-201ENST00000624894 515 ntBASIC15.41■□□□□ 0.06
THBS1P07996 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC15.41■□□□□ 0.06
THBS1P07996 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
THBS1P07996 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.41■□□□□ 0.06
THBS1P07996 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
THBS1P07996 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.41■□□□□ 0.06
THBS1P07996 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.41■□□□□ 0.06
THBS1P07996 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.41■□□□□ 0.06
THBS1P07996 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
THBS1P07996 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
THBS1P07996 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
THBS1P07996 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms