Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
HIST1H2ABP04908 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H2ABP04908 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.33■□□□□ 0.04
HIST1H2ABP04908 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H2ABP04908 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H2ABP04908 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H2ABP04908 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIST1H2ABP04908 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 AL391256.1-201ENST00000443260 1855 ntBASIC15.32■□□□□ 0.04
HIST1H2ABP04908 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 NMU-205ENST00000511469 756 ntTSL 3 BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 AL139424.1-201ENST00000607572 797 ntBASIC15.32■□□□□ 0.04
HIST1H2ABP04908 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 KRT8P49-201ENST00000604166 1432 ntBASIC15.32■□□□□ 0.04
HIST1H2ABP04908 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIST1H2ABP04908 AC079328.2-201ENST00000561241 3354 ntBASIC15.32■□□□□ 0.04
HIST1H2ABP04908 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 DOC2GP-204ENST00000639052 2548 ntBASIC15.31■□□□□ 0.04
HIST1H2ABP04908 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.31■□□□□ 0.04
HIST1H2ABP04908 SAPCD2P3-201ENST00000455031 850 ntBASIC15.31■□□□□ 0.04
HIST1H2ABP04908 FGFR3P6-201ENST00000457012 610 ntBASIC15.31■□□□□ 0.04
HIST1H2ABP04908 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HIST1H2ABP04908 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
HIST1H2ABP04908 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms