Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF13O43567 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF13O43567 CLEC4GP1-201ENST00000596555 870 ntBASIC15.3■□□□□ 0.04
RNF13O43567 MTDHP4-201ENST00000600287 670 ntBASIC15.3■□□□□ 0.04
RNF13O43567 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
RNF13O43567 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF13O43567 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF13O43567 AC012313.10-201ENST00000623509 926 ntBASIC15.3■□□□□ 0.04
RNF13O43567 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
RNF13O43567 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF13O43567 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF13O43567 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.3■□□□□ 0.04
RNF13O43567 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF13O43567 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF13O43567 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
RNF13O43567 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
RNF13O43567 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
RNF13O43567 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF13O43567 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF13O43567 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF13O43567 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF13O43567 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF13O43567 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF13O43567 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF13O43567 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF13O43567 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF13O43567 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
RNF13O43567 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF13O43567 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RNF13O43567 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF13O43567 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
RNF13O43567 AC243591.1-201ENST00000452967 1364 ntBASIC15.29■□□□□ 0.04
RNF13O43567 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF13O43567 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF13O43567 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF13O43567 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.29■□□□□ 0.04
RNF13O43567 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
RNF13O43567 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF13O43567 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF13O43567 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
RNF13O43567 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF13O43567 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF13O43567 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF13O43567 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
RNF13O43567 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.29■□□□□ 0.04
RNF13O43567 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.29■□□□□ 0.04
RNF13O43567 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
RNF13O43567 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF13O43567 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF13O43567 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
RNF13O43567 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF13O43567 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RNF13O43567 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF13O43567 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF13O43567 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF13O43567 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF13O43567 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF13O43567 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RNF13O43567 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF13O43567 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF13O43567 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
RNF13O43567 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF13O43567 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF13O43567 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF13O43567 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF13O43567 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
RNF13O43567 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF13O43567 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF13O43567 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF13O43567 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF13O43567 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.28■□□□□ 0.04
RNF13O43567 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.28■□□□□ 0.04
RNF13O43567 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.28■□□□□ 0.04
RNF13O43567 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.28■□□□□ 0.04
RNF13O43567 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF13O43567 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
RNF13O43567 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF13O43567 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF13O43567 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF13O43567 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RNF13O43567 TBCB-205ENST00000585746 875 ntTSL 3 BASIC15.28■□□□□ 0.04
RNF13O43567 AL139424.1-201ENST00000607572 797 ntBASIC15.28■□□□□ 0.04
RNF13O43567 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF13O43567 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF13O43567 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF13O43567 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF13O43567 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF13O43567 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF13O43567 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF13O43567 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RNF13O43567 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF13O43567 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF13O43567 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF13O43567 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.28■□□□□ 0.04
RNF13O43567 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF13O43567 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF13O43567 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.28■□□□□ 0.04
RNF13O43567 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF13O43567 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RNF13O43567 AL596257.1-201ENST00000641463 2694 ntBASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms