Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CHL1O00533 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
CHL1O00533 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.37■■□□□ 1.01
CHL1O00533 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC21.36■■□□□ 1.01
CHL1O00533 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CHL1O00533 AP3S2-216ENST00000617003 1561 ntBASIC21.36■■□□□ 1.01
CHL1O00533 AC092171.3-201ENST00000610122 2651 ntBASIC21.36■■□□□ 1.01
CHL1O00533 AC011676.5-201ENST00000624864 2660 ntBASIC21.36■■□□□ 1.01
CHL1O00533 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHL1O00533 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHL1O00533 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
CHL1O00533 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC21.36■■□□□ 1.01
CHL1O00533 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHL1O00533 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC21.36■■□□□ 1.01
CHL1O00533 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHL1O00533 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC21.36■■□□□ 1.01
CHL1O00533 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHL1O00533 GOLGA2P9-201ENST00000596977 1937 ntBASIC21.36■■□□□ 1.01
CHL1O00533 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHL1O00533 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHL1O00533 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHL1O00533 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC21.36■■□□□ 1.01
CHL1O00533 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC21.36■■□□□ 1.01
CHL1O00533 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHL1O00533 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CHL1O00533 SPTSSB-204ENST00000617024 1292 ntBASIC21.36■■□□□ 1.01
CHL1O00533 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC21.36■■□□□ 1.01
CHL1O00533 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CHL1O00533 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC21.36■■□□□ 1.01
CHL1O00533 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHL1O00533 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
CHL1O00533 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC21.36■■□□□ 1.01
CHL1O00533 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHL1O00533 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CHL1O00533 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC21.36■■□□□ 1.01
CHL1O00533 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CHL1O00533 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CHL1O00533 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHL1O00533 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
CHL1O00533 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CHL1O00533 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC21.35■■□□□ 1.01
CHL1O00533 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHL1O00533 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC21.35■■□□□ 1.01
CHL1O00533 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHL1O00533 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHL1O00533 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CHL1O00533 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHL1O00533 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC21.35■■□□□ 1.01
CHL1O00533 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC21.35■■□□□ 1.01
CHL1O00533 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC21.35■■□□□ 1.01
CHL1O00533 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC21.35■■□□□ 1.01
CHL1O00533 AC098859.1-201ENST00000502915 1238 ntBASIC21.35■■□□□ 1.01
CHL1O00533 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC21.35■■□□□ 1.01
CHL1O00533 VPS29-207ENST00000549970 818 ntTSL 3 BASIC21.35■■□□□ 1.01
CHL1O00533 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
CHL1O00533 AC051619.7-201ENST00000568314 623 ntBASIC21.35■■□□□ 1.01
CHL1O00533 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC21.35■■□□□ 1.01
CHL1O00533 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.35■■□□□ 1.01
CHL1O00533 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHL1O00533 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC21.35■■□□□ 1.01
CHL1O00533 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CHL1O00533 AC008677.1-201ENST00000519230 1561 ntBASIC21.35■■□□□ 1.01
CHL1O00533 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHL1O00533 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CHL1O00533 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHL1O00533 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHL1O00533 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CHL1O00533 PCGF3-213ENST00000620529 1899 ntBASIC21.35■■□□□ 1.01
CHL1O00533 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHL1O00533 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC21.34■■□□□ 1.01
CHL1O00533 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHL1O00533 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC21.34■■□□□ 1.01
CHL1O00533 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC21.34■■□□□ 1.01
CHL1O00533 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC21.34■■□□□ 1.01
CHL1O00533 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHL1O00533 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHL1O00533 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC21.34■■□□□ 1.01
CHL1O00533 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
CHL1O00533 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHL1O00533 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHL1O00533 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHL1O00533 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHL1O00533 HNRNPFP1-201ENST00000391730 1133 ntBASIC21.34■■□□□ 1.01
CHL1O00533 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC21.34■■□□□ 1.01
CHL1O00533 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC21.34■■□□□ 1.01
CHL1O00533 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHL1O00533 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHL1O00533 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC21.34■■□□□ 1.01
CHL1O00533 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
CHL1O00533 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC21.34■■□□□ 1.01
CHL1O00533 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CHL1O00533 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CHL1O00533 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHL1O00533 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC21.33■■□□□ 1.01
CHL1O00533 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CHL1O00533 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHL1O00533 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHL1O00533 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CHL1O00533 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC21.33■■□□□ 1.01
CHL1O00533 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms