Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC28A1O00337 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC28A1O00337 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC28A1O00337 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC28A1O00337 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC28A1O00337 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC28A1O00337 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC28A1O00337 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC28A1O00337 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC28A1O00337 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC28A1O00337 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SLC28A1O00337 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
SLC28A1O00337 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.14■□□□□ 0.18
SLC28A1O00337 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.14■□□□□ 0.17
SLC28A1O00337 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A1O00337 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SLC28A1O00337 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SLC28A1O00337 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC28A1O00337 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC28A1O00337 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A1O00337 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A1O00337 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SLC28A1O00337 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC28A1O00337 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A1O00337 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SLC28A1O00337 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A1O00337 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A1O00337 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A1O00337 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
SLC28A1O00337 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A1O00337 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC28A1O00337 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A1O00337 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SLC28A1O00337 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.14■□□□□ 0.17
SLC28A1O00337 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A1O00337 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC28A1O00337 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC28A1O00337 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A1O00337 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A1O00337 TSPY19P-201ENST00000418461 509 ntBASIC16.14■□□□□ 0.17
SLC28A1O00337 TSPY18P-201ENST00000441642 509 ntBASIC16.14■□□□□ 0.17
SLC28A1O00337 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.14■□□□□ 0.17
SLC28A1O00337 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC28A1O00337 HCG4P8-203ENST00000443049 980 ntBASIC16.14■□□□□ 0.17
SLC28A1O00337 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A1O00337 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.14■□□□□ 0.17
SLC28A1O00337 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC28A1O00337 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A1O00337 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A1O00337 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A1O00337 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A1O00337 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC28A1O00337 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A1O00337 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A1O00337 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC28A1O00337 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A1O00337 AC022188.1-201ENST00000620960 1664 ntBASIC16.14■□□□□ 0.17
SLC28A1O00337 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A1O00337 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SLC28A1O00337 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC28A1O00337 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC28A1O00337 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A1O00337 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A1O00337 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A1O00337 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC28A1O00337 AL512652.2-201ENST00000625156 1716 ntBASIC16.14■□□□□ 0.17
SLC28A1O00337 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC28A1O00337 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC28A1O00337 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SLC28A1O00337 PCDHA1-201ENST00000378133 2726 ntBASIC16.13■□□□□ 0.17
SLC28A1O00337 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC28A1O00337 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SLC28A1O00337 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC28A1O00337 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC28A1O00337 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC28A1O00337 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC28A1O00337 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SLC28A1O00337 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
SLC28A1O00337 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SLC28A1O00337 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.13■□□□□ 0.17
SLC28A1O00337 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SLC28A1O00337 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC28A1O00337 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC28A1O00337 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SLC28A1O00337 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC28A1O00337 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.13■□□□□ 0.17
SLC28A1O00337 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC28A1O00337 AL805961.1-202ENST00000641562 540 ntBASIC16.13■□□□□ 0.17
SLC28A1O00337 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.13■□□□□ 0.17
SLC28A1O00337 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SLC28A1O00337 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC28A1O00337 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC28A1O00337 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC28A1O00337 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC28A1O00337 AL671710.1-201ENST00000610245 2349 ntBASIC16.13■□□□□ 0.17
SLC28A1O00337 AC131009.4-201ENST00000624048 1740 ntBASIC16.13■□□□□ 0.17
SLC28A1O00337 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC28A1O00337 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC28A1O00337 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC28A1O00337 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms