Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 SLC22A20-204ENST00000530038 1673 ntBASIC16.31■□□□□ 0.2
C4orf47A7E2U8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 AC135586.1-201ENST00000539323 574 ntBASIC16.31■□□□□ 0.2
C4orf47A7E2U8 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 LINC00896-202ENST00000609602 2128 ntBASIC16.31■□□□□ 0.2
C4orf47A7E2U8 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf47A7E2U8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 RPL37AP1-201ENST00000412502 279 ntBASIC16.3■□□□□ 0.2
C4orf47A7E2U8 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 AL353705.2-201ENST00000428243 662 ntBASIC16.3■□□□□ 0.2
C4orf47A7E2U8 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 AC106886.1-201ENST00000568660 600 ntBASIC16.3■□□□□ 0.2
C4orf47A7E2U8 AP001350.2-201ENST00000625104 1094 ntBASIC16.3■□□□□ 0.2
C4orf47A7E2U8 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C4orf47A7E2U8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf47A7E2U8 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf47A7E2U8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf47A7E2U8 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.29■□□□□ 0.2
C4orf47A7E2U8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf47A7E2U8 AL391825.1-201ENST00000457671 1364 ntBASIC16.29■□□□□ 0.2
C4orf47A7E2U8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf47A7E2U8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.29■□□□□ 0.2
C4orf47A7E2U8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf47A7E2U8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
C4orf47A7E2U8 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf47A7E2U8 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf47A7E2U8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
C4orf47A7E2U8 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms