Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
HFM1A2PYH4 BAD-202ENST00000394531 631 ntTSL 3 BASIC24.49■■□□□ 1.51
HFM1A2PYH4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC24.49■■□□□ 1.51
HFM1A2PYH4 AC092580.3-201ENST00000430932 139 ntBASIC24.49■■□□□ 1.51
HFM1A2PYH4 BAD-207ENST00000544785 525 ntTSL 3 BASIC24.49■■□□□ 1.51
HFM1A2PYH4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC24.49■■□□□ 1.51
HFM1A2PYH4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC24.49■■□□□ 1.51
HFM1A2PYH4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC24.49■■□□□ 1.51
HFM1A2PYH4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC24.49■■□□□ 1.51
HFM1A2PYH4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
HFM1A2PYH4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
HFM1A2PYH4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC24.49■■□□□ 1.51
HFM1A2PYH4 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC24.49■■□□□ 1.51
HFM1A2PYH4 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
HFM1A2PYH4 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
HFM1A2PYH4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
HFM1A2PYH4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC24.48■■□□□ 1.51
HFM1A2PYH4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
HFM1A2PYH4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
HFM1A2PYH4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
HFM1A2PYH4 AC106820.2-201ENST00000563775 3264 ntBASIC24.48■■□□□ 1.51
HFM1A2PYH4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
HFM1A2PYH4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
HFM1A2PYH4 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
HFM1A2PYH4 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC24.48■■□□□ 1.51
HFM1A2PYH4 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
HFM1A2PYH4 BCRP1-201ENST00000444246 691 ntBASIC24.48■■□□□ 1.51
HFM1A2PYH4 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
HFM1A2PYH4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
HFM1A2PYH4 DUX4L27-201ENST00000554796 1261 ntBASIC24.48■■□□□ 1.51
HFM1A2PYH4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
HFM1A2PYH4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC24.48■■□□□ 1.51
HFM1A2PYH4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
HFM1A2PYH4 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
HFM1A2PYH4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
HFM1A2PYH4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
HFM1A2PYH4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC24.48■■□□□ 1.51
HFM1A2PYH4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
HFM1A2PYH4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
HFM1A2PYH4 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
HFM1A2PYH4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
HFM1A2PYH4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
HFM1A2PYH4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
HFM1A2PYH4 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC24.47■■□□□ 1.51
HFM1A2PYH4 AC020916.1-201ENST00000587762 1774 ntBASIC24.47■■□□□ 1.51
HFM1A2PYH4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC24.47■■□□□ 1.51
HFM1A2PYH4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
HFM1A2PYH4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
HFM1A2PYH4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
HFM1A2PYH4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
HFM1A2PYH4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
HFM1A2PYH4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC24.47■■□□□ 1.51
HFM1A2PYH4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
HFM1A2PYH4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC24.47■■□□□ 1.51
HFM1A2PYH4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC24.47■■□□□ 1.51
HFM1A2PYH4 SATB1-217ENST00000493952 626 ntTSL 3 BASIC24.47■■□□□ 1.51
HFM1A2PYH4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
HFM1A2PYH4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
HFM1A2PYH4 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC24.47■■□□□ 1.51
HFM1A2PYH4 MIR4453-201ENST00000584019 89 ntBASIC24.47■■□□□ 1.51
HFM1A2PYH4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
HFM1A2PYH4 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC24.47■■□□□ 1.51
HFM1A2PYH4 COQ4-205ENST00000609948 956 ntTSL 2 BASIC24.47■■□□□ 1.51
HFM1A2PYH4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
HFM1A2PYH4 SPDYE12P-201ENST00000618416 771 ntBASIC24.47■■□□□ 1.51
HFM1A2PYH4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
HFM1A2PYH4 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
HFM1A2PYH4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC24.47■■□□□ 1.51
HFM1A2PYH4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
HFM1A2PYH4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
HFM1A2PYH4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
HFM1A2PYH4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
HFM1A2PYH4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
HFM1A2PYH4 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC24.46■■□□□ 1.51
HFM1A2PYH4 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
HFM1A2PYH4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
HFM1A2PYH4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC24.46■■□□□ 1.51
HFM1A2PYH4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
HFM1A2PYH4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
HFM1A2PYH4 WDR53-203ENST00000429115 683 ntTSL 2 BASIC24.46■■□□□ 1.51
HFM1A2PYH4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC24.46■■□□□ 1.51
HFM1A2PYH4 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC24.46■■□□□ 1.51
HFM1A2PYH4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC24.46■■□□□ 1.51
HFM1A2PYH4 AL096865.1-201ENST00000606796 927 ntBASIC24.46■■□□□ 1.51
HFM1A2PYH4 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC24.46■■□□□ 1.51
HFM1A2PYH4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC24.46■■□□□ 1.51
HFM1A2PYH4 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
HFM1A2PYH4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC24.46■■□□□ 1.51
HFM1A2PYH4 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC24.46■■□□□ 1.51
HFM1A2PYH4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
HFM1A2PYH4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
HFM1A2PYH4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
HFM1A2PYH4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC24.46■■□□□ 1.51
HFM1A2PYH4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
HFM1A2PYH4 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.51
HFM1A2PYH4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
HFM1A2PYH4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
HFM1A2PYH4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
HFM1A2PYH4 HLA-DRB6-201ENST00000411500 1235 ntBASIC24.45■■□□□ 1.51
HFM1A2PYH4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC24.45■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms