Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 PDPK2P-202ENST00000562415 1191 ntBASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 AC013467.2-201ENST00000605472 835 ntBASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 AC093028.1-201ENST00000622998 982 ntBASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 AC004877.2-201ENST00000623941 599 ntBASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHB1Q9Y5F3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 BCAR1-209ENST00000546196 1340 ntBASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 REXO1L3P-201ENST00000622202 1288 ntBASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 FLJ38576-201ENST00000623820 2459 ntBASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHB1Q9Y5F3 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 AC011467.4-201ENST00000594891 528 ntBASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 AC010654.1-201ENST00000615722 808 ntBASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 AL139011.1-202ENST00000642063 584 ntBASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 AC006277.1-201ENST00000624348 1610 ntBASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDHB1Q9Y5F3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB1Q9Y5F3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHB1Q9Y5F3 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDHB1Q9Y5F3 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDHB1Q9Y5F3 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDHB1Q9Y5F3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
PCDHB1Q9Y5F3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms