Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RCL1Q9Y2P8 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 GCSHP5-201ENST00000443090 522 ntBASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 FAM201B-201ENST00000458407 597 ntBASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 AC010491.1-201ENST00000563101 2797 ntBASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RCL1Q9Y2P8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 KRT8P10-201ENST00000450021 1447 ntBASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 GPR32P1-201ENST00000601788 811 ntBASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RCL1Q9Y2P8 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.75□□□□□ -0.21
RCL1Q9Y2P8 LINC00895-201ENST00000629028 1637 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms