Protein–RNA interactions for Protein: Q9UQR0

SCML2, Sex comb on midleg-like protein 2, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2Q9UQR0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
SCML2Q9UQR0 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.36■□□□□ 0.37
SCML2Q9UQR0 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.36■□□□□ 0.37
SCML2Q9UQR0 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.36■□□□□ 0.37
SCML2Q9UQR0 AP000842.3-202ENST00000569238 1080 ntBASIC17.36■□□□□ 0.37
SCML2Q9UQR0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.36■□□□□ 0.37
SCML2Q9UQR0 AC073389.1-201ENST00000595595 795 ntBASIC17.36■□□□□ 0.37
SCML2Q9UQR0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.36■□□□□ 0.37
SCML2Q9UQR0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SCML2Q9UQR0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCML2Q9UQR0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.36■□□□□ 0.37
SCML2Q9UQR0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCML2Q9UQR0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SCML2Q9UQR0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCML2Q9UQR0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCML2Q9UQR0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SCML2Q9UQR0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.36■□□□□ 0.37
SCML2Q9UQR0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCML2Q9UQR0 UXT-AS1-201ENST00000590504 1525 ntBASIC17.36■□□□□ 0.37
SCML2Q9UQR0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SCML2Q9UQR0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 AL031731.1-201ENST00000642131 2094 ntBASIC17.35■□□□□ 0.37
SCML2Q9UQR0 RNF216P1-203ENST00000404404 2427 ntBASIC17.35■□□□□ 0.37
SCML2Q9UQR0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SCML2Q9UQR0 AC080080.1-201ENST00000625121 2420 ntBASIC17.35■□□□□ 0.37
SCML2Q9UQR0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.34■□□□□ 0.37
SCML2Q9UQR0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 GPS2P2-201ENST00000430745 888 ntBASIC17.34■□□□□ 0.37
SCML2Q9UQR0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 AC105233.2-201ENST00000523697 349 ntBASIC17.34■□□□□ 0.37
SCML2Q9UQR0 AF228730.5-201ENST00000530288 346 ntBASIC17.34■□□□□ 0.37
SCML2Q9UQR0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 GPAA1P2-202ENST00000606848 1787 ntBASIC17.34■□□□□ 0.37
SCML2Q9UQR0 AC020765.3-201ENST00000613051 740 ntBASIC17.34■□□□□ 0.37
SCML2Q9UQR0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 GGT4P-201ENST00000623672 1708 ntBASIC17.34■□□□□ 0.37
SCML2Q9UQR0 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 LINC00628-201ENST00000628516 1289 ntBASIC17.34■□□□□ 0.37
SCML2Q9UQR0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.34■□□□□ 0.37
SCML2Q9UQR0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SCML2Q9UQR0 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCML2Q9UQR0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SCML2Q9UQR0 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.37
SCML2Q9UQR0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
SCML2Q9UQR0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SCML2Q9UQR0 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SCML2Q9UQR0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SCML2Q9UQR0 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.33■□□□□ 0.37
SCML2Q9UQR0 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.33■□□□□ 0.37
SCML2Q9UQR0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms