Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHA4Q9UN74 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHA4Q9UN74 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHA4Q9UN74 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHA4Q9UN74 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHA4Q9UN74 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHA4Q9UN74 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDHA4Q9UN74 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 AC084018.2-201ENST00000613093 2607 ntBASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 AC092474.2-201ENST00000424288 719 ntBASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 GGT3P-204ENST00000453783 1664 ntBASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHA4Q9UN74 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 GPAA1P2-202ENST00000606848 1787 ntBASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PCDHA4Q9UN74 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDHA4Q9UN74 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDHA4Q9UN74 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PCDHA4Q9UN74 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDHA4Q9UN74 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHA4Q9UN74 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHA4Q9UN74 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHA4Q9UN74 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PCDHA4Q9UN74 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHA4Q9UN74 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHA4Q9UN74 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHA4Q9UN74 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.08■□□□□ 0.64
PCDHA4Q9UN74 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHA4Q9UN74 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.08■□□□□ 0.64
PCDHA4Q9UN74 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PCDHA4Q9UN74 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHA4Q9UN74 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHA4Q9UN74 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHA4Q9UN74 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHA4Q9UN74 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PCDHA4Q9UN74 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHA4Q9UN74 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHA4Q9UN74 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHA4Q9UN74 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHA4Q9UN74 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHA4Q9UN74 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHA4Q9UN74 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms