Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14□□□□□ -0.17
SSBP3Q9BWW4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14□□□□□ -0.17
SSBP3Q9BWW4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
SSBP3Q9BWW4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 RHBDF1P1-201ENST00000427504 1941 ntBASIC14□□□□□ -0.17
SSBP3Q9BWW4 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14□□□□□ -0.17
SSBP3Q9BWW4 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14□□□□□ -0.17
SSBP3Q9BWW4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 AC002056.1-201ENST00000395613 760 ntBASIC14□□□□□ -0.17
SSBP3Q9BWW4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14□□□□□ -0.17
SSBP3Q9BWW4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14□□□□□ -0.17
SSBP3Q9BWW4 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14□□□□□ -0.17
SSBP3Q9BWW4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14□□□□□ -0.17
SSBP3Q9BWW4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14□□□□□ -0.17
SSBP3Q9BWW4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14□□□□□ -0.17
SSBP3Q9BWW4 AP001350.2-201ENST00000625104 1094 ntBASIC14□□□□□ -0.17
SSBP3Q9BWW4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14□□□□□ -0.17
SSBP3Q9BWW4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14□□□□□ -0.17
SSBP3Q9BWW4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
SSBP3Q9BWW4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SSBP3Q9BWW4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
SSBP3Q9BWW4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 KRT8P49-201ENST00000604166 1432 ntBASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 AL139384.1-201ENST00000612143 3047 ntBASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 TUBB8P12-201ENST00000308911 1335 ntBASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 TUBB7P-202ENST00000428444 1305 ntBASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 TUBB8P7-204ENST00000567960 1332 ntBASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 AP006288.1-201ENST00000446065 395 ntBASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 AP002472.1-201ENST00000577490 586 ntBASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.99□□□□□ -0.17
SSBP3Q9BWW4 AC011676.5-201ENST00000624864 2660 ntBASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms