Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFAF3Q9BU61 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFAF3Q9BU61 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFAF3Q9BU61 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFAF3Q9BU61 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFAF3Q9BU61 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFAF3Q9BU61 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFAF3Q9BU61 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
NDUFAF3Q9BU61 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFAF3Q9BU61 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFAF3Q9BU61 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFAF3Q9BU61 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.05□□□□□ -0.32
NDUFAF3Q9BU61 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
NDUFAF3Q9BU61 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 CR383656.2-201ENST00000548656 2254 ntBASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 HBZP1-201ENST00000354915 429 ntBASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 AL645929.1-201ENST00000420084 975 ntBASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 HCG4P8-203ENST00000443049 980 ntBASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 REEP1-209ENST00000541910 969 ntTSL 2 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 AL024508.2-201ENST00000607749 1894 ntBASIC13.04□□□□□ -0.32
NDUFAF3Q9BU61 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 AC113404.2-201ENST00000507884 177 ntBASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 AC116407.2-201ENST00000613639 860 ntBASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 HYMAI.1-201ENST00000620949 238 ntBASIC13.03□□□□□ -0.32
NDUFAF3Q9BU61 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms