Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC026396.1-201ENST00000419388 421 ntBASIC15.83■□□□□ 0.12
NR1H4Q96RI1 FAM197Y1-201ENST00000421178 764 ntBASIC15.83■□□□□ 0.12
NR1H4Q96RI1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 AC002558.1-201ENST00000488906 803 ntBASIC15.83■□□□□ 0.12
NR1H4Q96RI1 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 AC104390.1-201ENST00000555663 520 ntBASIC15.83■□□□□ 0.12
NR1H4Q96RI1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 MIR6786-201ENST00000616843 113 ntBASIC15.83■□□□□ 0.12
NR1H4Q96RI1 AL359736.2-201ENST00000621992 437 ntBASIC15.83■□□□□ 0.12
NR1H4Q96RI1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 AC002310.6-201ENST00000624451 1377 ntBASIC15.83■□□□□ 0.12
NR1H4Q96RI1 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NR1H4Q96RI1 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 LINC01101-201ENST00000622953 1884 ntBASIC15.82■□□□□ 0.12
NR1H4Q96RI1 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 TSPY20P-201ENST00000450910 630 ntBASIC15.82■□□□□ 0.12
NR1H4Q96RI1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 TUBB8P12-201ENST00000308911 1335 ntBASIC15.82■□□□□ 0.12
NR1H4Q96RI1 TUBB7P-202ENST00000428444 1305 ntBASIC15.82■□□□□ 0.12
NR1H4Q96RI1 TUBB8P7-204ENST00000567960 1332 ntBASIC15.82■□□□□ 0.12
NR1H4Q96RI1 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 LINC00528-201ENST00000600723 2160 ntBASIC15.82■□□□□ 0.12
NR1H4Q96RI1 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
NR1H4Q96RI1 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NR1H4Q96RI1 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NR1H4Q96RI1 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NR1H4Q96RI1 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NR1H4Q96RI1 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
NR1H4Q96RI1 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NR1H4Q96RI1 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NR1H4Q96RI1 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.81■□□□□ 0.12
NR1H4Q96RI1 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
NR1H4Q96RI1 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
NR1H4Q96RI1 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NR1H4Q96RI1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
NR1H4Q96RI1 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
NR1H4Q96RI1 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
NR1H4Q96RI1 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.81■□□□□ 0.12
NR1H4Q96RI1 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.81■□□□□ 0.12
NR1H4Q96RI1 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.81■□□□□ 0.12
NR1H4Q96RI1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
NR1H4Q96RI1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
NR1H4Q96RI1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms