Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 MRPL20P1-201ENST00000400819 433 ntBASIC16.33■□□□□ 0.2
RHBDF1Q96CC6 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.33■□□□□ 0.2
RHBDF1Q96CC6 AC092910.1-201ENST00000482027 1129 ntBASIC16.33■□□□□ 0.2
RHBDF1Q96CC6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RHBDF1Q96CC6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.33■□□□□ 0.2
RHBDF1Q96CC6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.33■□□□□ 0.2
RHBDF1Q96CC6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.33■□□□□ 0.2
RHBDF1Q96CC6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.33■□□□□ 0.2
RHBDF1Q96CC6 AC004790.2-201ENST00000623588 572 ntBASIC16.33■□□□□ 0.2
RHBDF1Q96CC6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RHBDF1Q96CC6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RHBDF1Q96CC6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RHBDF1Q96CC6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RHBDF1Q96CC6 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RHBDF1Q96CC6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RHBDF1Q96CC6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RHBDF1Q96CC6 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
RHBDF1Q96CC6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.33■□□□□ 0.2
RHBDF1Q96CC6 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RHBDF1Q96CC6 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RHBDF1Q96CC6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.33■□□□□ 0.2
RHBDF1Q96CC6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.33■□□□□ 0.2
RHBDF1Q96CC6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RHBDF1Q96CC6 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RHBDF1Q96CC6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 MRPL3P1-201ENST00000400109 1033 ntBASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 RNA5SP419-201ENST00000515908 135 ntBASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 AC087641.1-201ENST00000557561 1021 ntBASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.32■□□□□ 0.2
RHBDF1Q96CC6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 GGT3P-204ENST00000453783 1664 ntBASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 HCG4-201ENST00000418983 998 ntBASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.31■□□□□ 0.2
RHBDF1Q96CC6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms