Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.11■□□□□ 0.33
DNAAF3Q8N9W5 ELK2BP-201ENST00000415014 1224 ntBASIC17.11■□□□□ 0.33
DNAAF3Q8N9W5 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.11■□□□□ 0.33
DNAAF3Q8N9W5 OR7E14P-202ENST00000530490 1290 ntBASIC17.11■□□□□ 0.33
DNAAF3Q8N9W5 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.11■□□□□ 0.33
DNAAF3Q8N9W5 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
DNAAF3Q8N9W5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.11■□□□□ 0.33
DNAAF3Q8N9W5 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.11■□□□□ 0.33
DNAAF3Q8N9W5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.11■□□□□ 0.33
DNAAF3Q8N9W5 AC107918.4-202ENST00000641623 219 ntBASIC17.11■□□□□ 0.33
DNAAF3Q8N9W5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
DNAAF3Q8N9W5 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNAAF3Q8N9W5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
DNAAF3Q8N9W5 TOP3BP1-201ENST00000420768 1380 ntBASIC17.11■□□□□ 0.33
DNAAF3Q8N9W5 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.11■□□□□ 0.33
DNAAF3Q8N9W5 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.11■□□□□ 0.33
DNAAF3Q8N9W5 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
DNAAF3Q8N9W5 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
DNAAF3Q8N9W5 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNAAF3Q8N9W5 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.11■□□□□ 0.33
DNAAF3Q8N9W5 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
DNAAF3Q8N9W5 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 RPS2P1-201ENST00000434010 821 ntBASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 AC087163.2-201ENST00000457299 853 ntBASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 UNC93B7-201ENST00000509439 705 ntBASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 AF228730.7-201ENST00000641842 219 ntBASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 AC006277.1-201ENST00000624348 1610 ntBASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF3Q8N9W5 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DNAAF3Q8N9W5 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
DNAAF3Q8N9W5 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
DNAAF3Q8N9W5 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms