Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD1Q8N668 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC14□□□□□ -0.17
COMMD1Q8N668 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD1Q8N668 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14□□□□□ -0.17
COMMD1Q8N668 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
COMMD1Q8N668 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14□□□□□ -0.17
COMMD1Q8N668 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14□□□□□ -0.17
COMMD1Q8N668 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD1Q8N668 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14□□□□□ -0.17
COMMD1Q8N668 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD1Q8N668 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD1Q8N668 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14□□□□□ -0.17
COMMD1Q8N668 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD1Q8N668 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14□□□□□ -0.17
COMMD1Q8N668 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14□□□□□ -0.17
COMMD1Q8N668 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD1Q8N668 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
COMMD1Q8N668 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD1Q8N668 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD1Q8N668 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD1Q8N668 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD1Q8N668 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14□□□□□ -0.17
COMMD1Q8N668 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14□□□□□ -0.17
COMMD1Q8N668 NUS1P2-201ENST00000417358 873 ntBASIC14□□□□□ -0.17
COMMD1Q8N668 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD1Q8N668 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14□□□□□ -0.17
COMMD1Q8N668 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14□□□□□ -0.17
COMMD1Q8N668 AC096582.2-201ENST00000510860 516 ntBASIC14□□□□□ -0.17
COMMD1Q8N668 AP005901.3-202ENST00000581653 237 ntBASIC14□□□□□ -0.17
COMMD1Q8N668 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14□□□□□ -0.17
COMMD1Q8N668 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14□□□□□ -0.17
COMMD1Q8N668 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
COMMD1Q8N668 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD1Q8N668 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD1Q8N668 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD1Q8N668 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14□□□□□ -0.17
COMMD1Q8N668 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14□□□□□ -0.17
COMMD1Q8N668 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD1Q8N668 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD1Q8N668 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD1Q8N668 AC100803.2-201ENST00000562459 1963 ntBASIC14□□□□□ -0.17
COMMD1Q8N668 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD1Q8N668 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD1Q8N668 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COMMD1Q8N668 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
COMMD1Q8N668 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
COMMD1Q8N668 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COMMD1Q8N668 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.99□□□□□ -0.17
COMMD1Q8N668 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.99□□□□□ -0.17
COMMD1Q8N668 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COMMD1Q8N668 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC13.99□□□□□ -0.17
COMMD1Q8N668 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COMMD1Q8N668 AC097374.2-201ENST00000618617 1306 ntBASIC13.99□□□□□ -0.17
COMMD1Q8N668 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COMMD1Q8N668 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COMMD1Q8N668 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
COMMD1Q8N668 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.99□□□□□ -0.17
COMMD1Q8N668 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC13.99□□□□□ -0.17
COMMD1Q8N668 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.99□□□□□ -0.17
COMMD1Q8N668 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.99□□□□□ -0.17
COMMD1Q8N668 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COMMD1Q8N668 RN7SL510P-201ENST00000581311 263 ntBASIC13.99□□□□□ -0.17
COMMD1Q8N668 AL591684.3-201ENST00000605187 298 ntBASIC13.99□□□□□ -0.17
COMMD1Q8N668 AL138831.2-201ENST00000606564 490 ntBASIC13.99□□□□□ -0.17
COMMD1Q8N668 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COMMD1Q8N668 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
COMMD1Q8N668 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COMMD1Q8N668 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COMMD1Q8N668 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COMMD1Q8N668 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.99□□□□□ -0.17
COMMD1Q8N668 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COMMD1Q8N668 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC13.99□□□□□ -0.17
COMMD1Q8N668 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COMMD1Q8N668 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
COMMD1Q8N668 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COMMD1Q8N668 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
COMMD1Q8N668 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COMMD1Q8N668 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COMMD1Q8N668 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COMMD1Q8N668 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13.98□□□□□ -0.17
COMMD1Q8N668 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13.98□□□□□ -0.17
COMMD1Q8N668 LINC02012-201ENST00000608206 1725 ntBASIC13.98□□□□□ -0.17
COMMD1Q8N668 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COMMD1Q8N668 PAUPAR-201ENST00000630360 2965 ntBASIC13.98□□□□□ -0.17
COMMD1Q8N668 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COMMD1Q8N668 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.98□□□□□ -0.17
COMMD1Q8N668 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.98□□□□□ -0.17
COMMD1Q8N668 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COMMD1Q8N668 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COMMD1Q8N668 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
COMMD1Q8N668 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COMMD1Q8N668 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.98□□□□□ -0.17
COMMD1Q8N668 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.98□□□□□ -0.17
COMMD1Q8N668 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
COMMD1Q8N668 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC13.98□□□□□ -0.17
COMMD1Q8N668 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
COMMD1Q8N668 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
COMMD1Q8N668 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.98□□□□□ -0.17
COMMD1Q8N668 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
COMMD1Q8N668 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms