Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.01■□□□□ 0.31
PGBD3Q8N328 AC107890.1-201ENST00000422478 521 ntBASIC17.01■□□□□ 0.31
PGBD3Q8N328 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PGBD3Q8N328 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PGBD3Q8N328 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.01■□□□□ 0.31
PGBD3Q8N328 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PGBD3Q8N328 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.01■□□□□ 0.31
PGBD3Q8N328 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.01■□□□□ 0.31
PGBD3Q8N328 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.01■□□□□ 0.31
PGBD3Q8N328 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.01■□□□□ 0.31
PGBD3Q8N328 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PGBD3Q8N328 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.01■□□□□ 0.31
PGBD3Q8N328 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PGBD3Q8N328 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.01■□□□□ 0.31
PGBD3Q8N328 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PGBD3Q8N328 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
PGBD3Q8N328 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.01■□□□□ 0.31
PGBD3Q8N328 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PGBD3Q8N328 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PGBD3Q8N328 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.01■□□□□ 0.31
PGBD3Q8N328 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
PGBD3Q8N328 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PGBD3Q8N328 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17■□□□□ 0.31
PGBD3Q8N328 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PGBD3Q8N328 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17■□□□□ 0.31
PGBD3Q8N328 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17■□□□□ 0.31
PGBD3Q8N328 AL353732.1-201ENST00000569618 1459 ntBASIC17■□□□□ 0.31
PGBD3Q8N328 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17■□□□□ 0.31
PGBD3Q8N328 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17■□□□□ 0.31
PGBD3Q8N328 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PGBD3Q8N328 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17■□□□□ 0.31
PGBD3Q8N328 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17■□□□□ 0.31
PGBD3Q8N328 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PGBD3Q8N328 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PGBD3Q8N328 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17■□□□□ 0.31
PGBD3Q8N328 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17■□□□□ 0.31
PGBD3Q8N328 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PGBD3Q8N328 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17■□□□□ 0.31
PGBD3Q8N328 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17■□□□□ 0.31
PGBD3Q8N328 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17■□□□□ 0.31
PGBD3Q8N328 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PGBD3Q8N328 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17■□□□□ 0.31
PGBD3Q8N328 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PGBD3Q8N328 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17■□□□□ 0.31
PGBD3Q8N328 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17■□□□□ 0.31
PGBD3Q8N328 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17■□□□□ 0.31
PGBD3Q8N328 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17■□□□□ 0.31
PGBD3Q8N328 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PGBD3Q8N328 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17■□□□□ 0.31
PGBD3Q8N328 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PGBD3Q8N328 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PGBD3Q8N328 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17■□□□□ 0.31
PGBD3Q8N328 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PGBD3Q8N328 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17■□□□□ 0.31
PGBD3Q8N328 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17■□□□□ 0.31
PGBD3Q8N328 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PGBD3Q8N328 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
PGBD3Q8N328 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PGBD3Q8N328 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
PGBD3Q8N328 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17■□□□□ 0.31
PGBD3Q8N328 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17■□□□□ 0.31
PGBD3Q8N328 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PGBD3Q8N328 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PGBD3Q8N328 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PGBD3Q8N328 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PGBD3Q8N328 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PGBD3Q8N328 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.99■□□□□ 0.31
PGBD3Q8N328 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PGBD3Q8N328 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PGBD3Q8N328 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.99■□□□□ 0.31
PGBD3Q8N328 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
PGBD3Q8N328 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PGBD3Q8N328 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.99■□□□□ 0.31
PGBD3Q8N328 SPDYE7P-202ENST00000420373 878 ntBASIC16.99■□□□□ 0.31
PGBD3Q8N328 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PGBD3Q8N328 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.99■□□□□ 0.31
PGBD3Q8N328 AL512638.1-201ENST00000457493 794 ntBASIC16.99■□□□□ 0.31
PGBD3Q8N328 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.99■□□□□ 0.31
PGBD3Q8N328 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.99■□□□□ 0.31
PGBD3Q8N328 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.99■□□□□ 0.31
PGBD3Q8N328 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PGBD3Q8N328 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PGBD3Q8N328 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC16.99■□□□□ 0.31
PGBD3Q8N328 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PGBD3Q8N328 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PGBD3Q8N328 AC141586.5-201ENST00000624546 2050 ntBASIC16.99■□□□□ 0.31
PGBD3Q8N328 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PGBD3Q8N328 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PGBD3Q8N328 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PGBD3Q8N328 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PGBD3Q8N328 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PGBD3Q8N328 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PGBD3Q8N328 AC009053.2-201ENST00000563701 2365 ntBASIC16.99■□□□□ 0.31
PGBD3Q8N328 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.99■□□□□ 0.31
PGBD3Q8N328 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PGBD3Q8N328 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.99■□□□□ 0.31
PGBD3Q8N328 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PGBD3Q8N328 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PGBD3Q8N328 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PGBD3Q8N328 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms