Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 AL138831.2-201ENST00000606564 490 ntBASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TRIM42Q8IWZ5 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 Z83836.1-201ENST00000624605 1642 ntBASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 KLF4P1-201ENST00000412782 1185 ntBASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 AL671277.2-201ENST00000458060 996 ntBASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 PAUPAR-201ENST00000630360 2965 ntBASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TRIM42Q8IWZ5 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 AC112907.2-201ENST00000448639 330 ntBASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 AL139011.1-202ENST00000642063 584 ntBASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRIM42Q8IWZ5 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms