Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14□□□□□ -0.17
ZNF546Q86UE3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 REXO1L10P-201ENST00000615707 1290 ntBASIC13.99□□□□□ -0.17
ZNF546Q86UE3 REXO1L12P-201ENST00000622156 912 ntBASIC13.99□□□□□ -0.17
ZNF546Q86UE3 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZNF546Q86UE3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 PCDHA3-202ENST00000532566 4594 ntBASIC13.98□□□□□ -0.17
ZNF546Q86UE3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 PRAL-201ENST00000624952 3286 ntBASIC13.98□□□□□ -0.17
ZNF546Q86UE3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 TUBB8P12-201ENST00000308911 1335 ntBASIC13.98□□□□□ -0.17
ZNF546Q86UE3 TUBB7P-202ENST00000428444 1305 ntBASIC13.98□□□□□ -0.17
ZNF546Q86UE3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 TUBB8P7-204ENST00000567960 1332 ntBASIC13.98□□□□□ -0.17
ZNF546Q86UE3 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 OR2I1P-209ENST00000641730 5365 ntBASIC13.98□□□□□ -0.17
ZNF546Q86UE3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
ZNF546Q86UE3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 AC097376.2-205ENST00000610159 5334 ntBASIC13.97□□□□□ -0.17
ZNF546Q86UE3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF546Q86UE3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms