Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 AL590787.1-201ENST00000568856 1315 ntBASIC17.16■□□□□ 0.34
CASC4Q6P4E1 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CASC4Q6P4E1 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 AL356309.3-201ENST00000624132 1934 ntBASIC17.15■□□□□ 0.34
CASC4Q6P4E1 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 PRYP5-201ENST00000451909 266 ntBASIC17.15■□□□□ 0.34
CASC4Q6P4E1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 DUX4L17-201ENST00000557360 1267 ntBASIC17.15■□□□□ 0.34
CASC4Q6P4E1 MTDHP3-201ENST00000594186 672 ntBASIC17.15■□□□□ 0.34
CASC4Q6P4E1 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 AL139288.1-201ENST00000623748 933 ntBASIC17.15■□□□□ 0.34
CASC4Q6P4E1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CASC4Q6P4E1 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CASC4Q6P4E1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
CASC4Q6P4E1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
CASC4Q6P4E1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CASC4Q6P4E1 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.14■□□□□ 0.34
CASC4Q6P4E1 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
CASC4Q6P4E1 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 RBM17P3-201ENST00000417687 1192 ntBASIC17.14■□□□□ 0.33
CASC4Q6P4E1 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 NORAD-201ENST00000565493 5339 ntBASIC17.14■□□□□ 0.33
CASC4Q6P4E1 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CASC4Q6P4E1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 KRT8P49-201ENST00000604166 1432 ntBASIC17.13■□□□□ 0.33
CASC4Q6P4E1 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CASC4Q6P4E1 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms