Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 GGT3P-204ENST00000453783 1664 ntBASIC23.62■■□□□ 1.37
CLTCL1P53675 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC23.62■■□□□ 1.37
CLTCL1P53675 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC23.62■■□□□ 1.37
CLTCL1P53675 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
CLTCL1P53675 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLTCL1P53675 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLTCL1P53675 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
CLTCL1P53675 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CLTCL1P53675 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLTCL1P53675 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
CLTCL1P53675 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLTCL1P53675 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC23.62■■□□□ 1.37
CLTCL1P53675 GNAQP1-201ENST00000444815 1067 ntBASIC23.62■■□□□ 1.37
CLTCL1P53675 AL589987.1-201ENST00000453380 819 ntBASIC23.62■■□□□ 1.37
CLTCL1P53675 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC23.62■■□□□ 1.37
CLTCL1P53675 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC23.62■■□□□ 1.37
CLTCL1P53675 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLTCL1P53675 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC23.62■■□□□ 1.37
CLTCL1P53675 AC018470.1-201ENST00000624790 3129 ntBASIC23.62■■□□□ 1.37
CLTCL1P53675 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
CLTCL1P53675 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLTCL1P53675 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLTCL1P53675 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC23.61■■□□□ 1.37
CLTCL1P53675 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLTCL1P53675 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLTCL1P53675 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLTCL1P53675 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC23.61■■□□□ 1.37
CLTCL1P53675 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLTCL1P53675 DFFBP1-201ENST00000433250 979 ntBASIC23.61■■□□□ 1.37
CLTCL1P53675 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
CLTCL1P53675 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC23.61■■□□□ 1.37
CLTCL1P53675 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC23.61■■□□□ 1.37
CLTCL1P53675 AC005915.1-201ENST00000624912 2018 ntBASIC23.61■■□□□ 1.37
CLTCL1P53675 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CLTCL1P53675 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLTCL1P53675 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLTCL1P53675 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC23.6■■□□□ 1.37
CLTCL1P53675 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC23.6■■□□□ 1.37
CLTCL1P53675 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CLTCL1P53675 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
CLTCL1P53675 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CLTCL1P53675 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC23.6■■□□□ 1.37
CLTCL1P53675 DGCR5-201ENST00000399539 862 ntBASIC23.6■■□□□ 1.37
CLTCL1P53675 AC079776.1-201ENST00000401540 1152 ntBASIC23.6■■□□□ 1.37
CLTCL1P53675 SPDYE17-201ENST00000412399 783 ntBASIC23.6■■□□□ 1.37
CLTCL1P53675 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC23.6■■□□□ 1.37
CLTCL1P53675 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC23.6■■□□□ 1.37
CLTCL1P53675 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC23.6■■□□□ 1.37
CLTCL1P53675 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC23.6■■□□□ 1.37
CLTCL1P53675 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC23.6■■□□□ 1.37
CLTCL1P53675 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLTCL1P53675 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
CLTCL1P53675 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC23.6■■□□□ 1.37
CLTCL1P53675 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC23.6■■□□□ 1.37
CLTCL1P53675 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLTCL1P53675 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLTCL1P53675 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLTCL1P53675 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CLTCL1P53675 AL109936.8-201ENST00000641772 604 ntBASIC23.59■■□□□ 1.37
CLTCL1P53675 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC23.59■■□□□ 1.37
CLTCL1P53675 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC23.59■■□□□ 1.37
CLTCL1P53675 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
CLTCL1P53675 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC23.59■■□□□ 1.37
CLTCL1P53675 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLTCL1P53675 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLTCL1P53675 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLTCL1P53675 PCGF3-213ENST00000620529 1899 ntBASIC23.59■■□□□ 1.37
CLTCL1P53675 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLTCL1P53675 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
CLTCL1P53675 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC23.59■■□□□ 1.37
CLTCL1P53675 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
CLTCL1P53675 GK-202ENST00000378941 458 ntTSL 3 BASIC23.59■■□□□ 1.37
CLTCL1P53675 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC23.59■■□□□ 1.37
CLTCL1P53675 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC23.59■■□□□ 1.37
CLTCL1P53675 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC23.59■■□□□ 1.37
CLTCL1P53675 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC23.59■■□□□ 1.37
CLTCL1P53675 5S_rRNA.22-201ENST00000614916 106 ntBASIC23.59■■□□□ 1.37
CLTCL1P53675 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CLTCL1P53675 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLTCL1P53675 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
CLTCL1P53675 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
CLTCL1P53675 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC23.58■■□□□ 1.37
CLTCL1P53675 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC23.58■■□□□ 1.37
CLTCL1P53675 HLA-A-202ENST00000376806 1854 ntBASIC23.58■■□□□ 1.37
CLTCL1P53675 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
CLTCL1P53675 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CLTCL1P53675 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC23.58■■□□□ 1.37
CLTCL1P53675 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CLTCL1P53675 AC078925.2-201ENST00000624013 1973 ntBASIC23.58■■□□□ 1.37
CLTCL1P53675 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
CLTCL1P53675 SPDYE19P-201ENST00000338590 713 ntBASIC23.58■■□□□ 1.36
CLTCL1P53675 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
CLTCL1P53675 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC23.58■■□□□ 1.36
CLTCL1P53675 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
CLTCL1P53675 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
CLTCL1P53675 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CLTCL1P53675 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLTCL1P53675 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLTCL1P53675 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLTCL1P53675 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms