Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.31□□□□□ -0.28
CDC34P49427 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.31□□□□□ -0.28
CDC34P49427 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CDC34P49427 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
CDC34P49427 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC13.31□□□□□ -0.28
CDC34P49427 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.31□□□□□ -0.28
CDC34P49427 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.31□□□□□ -0.28
CDC34P49427 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.31□□□□□ -0.28
CDC34P49427 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 AL135999.2-201ENST00000622438 1686 ntBASIC13.31□□□□□ -0.28
CDC34P49427 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDC34P49427 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.3□□□□□ -0.28
CDC34P49427 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CDC34P49427 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.3□□□□□ -0.28
CDC34P49427 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.3□□□□□ -0.28
CDC34P49427 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
CDC34P49427 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CDC34P49427 HMGA1P5-201ENST00000412453 271 ntBASIC13.3□□□□□ -0.28
CDC34P49427 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.3□□□□□ -0.28
CDC34P49427 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC13.3□□□□□ -0.28
CDC34P49427 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.3□□□□□ -0.28
CDC34P49427 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CDC34P49427 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.3□□□□□ -0.28
CDC34P49427 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.3□□□□□ -0.28
CDC34P49427 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CDC34P49427 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.3□□□□□ -0.28
CDC34P49427 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 AL353692.3-201ENST00000407031 1396 ntBASIC13.3□□□□□ -0.28
CDC34P49427 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.3□□□□□ -0.28
CDC34P49427 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CDC34P49427 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CDC34P49427 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.3□□□□□ -0.28
CDC34P49427 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CDC34P49427 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.29□□□□□ -0.28
CDC34P49427 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC13.29□□□□□ -0.28
CDC34P49427 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
CDC34P49427 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.29□□□□□ -0.28
CDC34P49427 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.29□□□□□ -0.28
CDC34P49427 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
CDC34P49427 IGHGP-201ENST00000390555 1178 ntBASIC13.29□□□□□ -0.28
CDC34P49427 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.29□□□□□ -0.28
CDC34P49427 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CDC34P49427 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC13.29□□□□□ -0.28
CDC34P49427 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms