Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.79□□□□□ -0.04
THBS4P35443 AL591424.1-201ENST00000442569 1213 ntBASIC14.79□□□□□ -0.04
THBS4P35443 KRT18P3-201ENST00000451602 1288 ntBASIC14.79□□□□□ -0.04
THBS4P35443 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
THBS4P35443 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.79□□□□□ -0.04
THBS4P35443 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS4P35443 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS4P35443 PMS2P7-201ENST00000506558 1336 ntBASIC14.79□□□□□ -0.04
THBS4P35443 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.79□□□□□ -0.04
THBS4P35443 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
THBS4P35443 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS4P35443 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.79□□□□□ -0.04
THBS4P35443 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.79□□□□□ -0.04
THBS4P35443 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
THBS4P35443 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS4P35443 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
THBS4P35443 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.79□□□□□ -0.04
THBS4P35443 PI4KAP1-204ENST00000612579 1703 ntBASIC14.79□□□□□ -0.04
THBS4P35443 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
THBS4P35443 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS4P35443 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS4P35443 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
THBS4P35443 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.79□□□□□ -0.04
THBS4P35443 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS4P35443 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS4P35443 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS4P35443 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
THBS4P35443 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
THBS4P35443 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
THBS4P35443 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
THBS4P35443 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.78□□□□□ -0.04
THBS4P35443 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.78□□□□□ -0.04
THBS4P35443 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
THBS4P35443 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
THBS4P35443 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC14.78□□□□□ -0.04
THBS4P35443 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.78□□□□□ -0.04
THBS4P35443 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
THBS4P35443 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
THBS4P35443 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
THBS4P35443 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.78□□□□□ -0.04
THBS4P35443 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
THBS4P35443 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
THBS4P35443 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.78□□□□□ -0.04
THBS4P35443 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
THBS4P35443 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.78□□□□□ -0.04
THBS4P35443 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.78□□□□□ -0.04
THBS4P35443 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
THBS4P35443 CRYGEP-201ENST00000412192 528 ntBASIC14.78□□□□□ -0.04
THBS4P35443 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.78□□□□□ -0.04
THBS4P35443 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.78□□□□□ -0.04
THBS4P35443 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
THBS4P35443 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.78□□□□□ -0.04
THBS4P35443 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.78□□□□□ -0.04
THBS4P35443 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.78□□□□□ -0.04
THBS4P35443 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.78□□□□□ -0.04
THBS4P35443 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.78□□□□□ -0.04
THBS4P35443 GGTLC5P-201ENST00000617623 998 ntBASIC14.78□□□□□ -0.04
THBS4P35443 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
THBS4P35443 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC14.78□□□□□ -0.04
THBS4P35443 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
THBS4P35443 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
THBS4P35443 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
THBS4P35443 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.78□□□□□ -0.04
THBS4P35443 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
THBS4P35443 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
THBS4P35443 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
THBS4P35443 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
THBS4P35443 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
THBS4P35443 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
THBS4P35443 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.77□□□□□ -0.04
THBS4P35443 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.77□□□□□ -0.04
THBS4P35443 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
THBS4P35443 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
THBS4P35443 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
THBS4P35443 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
THBS4P35443 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
THBS4P35443 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.77□□□□□ -0.04
THBS4P35443 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
THBS4P35443 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
THBS4P35443 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
THBS4P35443 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
THBS4P35443 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
THBS4P35443 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
THBS4P35443 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.77□□□□□ -0.04
THBS4P35443 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
THBS4P35443 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
THBS4P35443 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
THBS4P35443 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
THBS4P35443 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
THBS4P35443 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
THBS4P35443 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.77□□□□□ -0.05
THBS4P35443 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
THBS4P35443 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
THBS4P35443 MRPL20P1-201ENST00000400819 433 ntBASIC14.77□□□□□ -0.05
THBS4P35443 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.77□□□□□ -0.05
THBS4P35443 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.77□□□□□ -0.05
THBS4P35443 RNA5SP416-201ENST00000516838 111 ntBASIC14.77□□□□□ -0.05
THBS4P35443 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.77□□□□□ -0.05
THBS4P35443 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.77□□□□□ -0.05
THBS4P35443 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms