Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
HOXC12P31275 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
HOXC12P31275 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.9□□□□□ -0.02
HOXC12P31275 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HOXC12P31275 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
HOXC12P31275 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HOXC12P31275 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HOXC12P31275 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HOXC12P31275 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.9□□□□□ -0.02
HOXC12P31275 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HOXC12P31275 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.9□□□□□ -0.02
HOXC12P31275 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HOXC12P31275 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.9□□□□□ -0.02
HOXC12P31275 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HOXC12P31275 CXCL1P1-201ENST00000502804 216 ntBASIC14.9□□□□□ -0.02
HOXC12P31275 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
HOXC12P31275 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.9□□□□□ -0.02
HOXC12P31275 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.9□□□□□ -0.02
HOXC12P31275 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HOXC12P31275 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HOXC12P31275 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.9□□□□□ -0.02
HOXC12P31275 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HOXC12P31275 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.9□□□□□ -0.02
HOXC12P31275 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HOXC12P31275 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HOXC12P31275 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HOXC12P31275 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HOXC12P31275 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HOXC12P31275 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
HOXC12P31275 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.89□□□□□ -0.03
HOXC12P31275 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HOXC12P31275 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HOXC12P31275 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HOXC12P31275 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HOXC12P31275 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.89□□□□□ -0.03
HOXC12P31275 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
HOXC12P31275 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HOXC12P31275 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HOXC12P31275 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HOXC12P31275 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.89□□□□□ -0.03
HOXC12P31275 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HOXC12P31275 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HOXC12P31275 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HOXC12P31275 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HOXC12P31275 HCG4B-203ENST00000450128 991 ntBASIC14.89□□□□□ -0.03
HOXC12P31275 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.89□□□□□ -0.03
HOXC12P31275 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.89□□□□□ -0.03
HOXC12P31275 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.89□□□□□ -0.03
HOXC12P31275 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.89□□□□□ -0.03
HOXC12P31275 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HOXC12P31275 AL078644.1-201ENST00000609881 752 ntBASIC14.89□□□□□ -0.03
HOXC12P31275 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
HOXC12P31275 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HOXC12P31275 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HOXC12P31275 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.89□□□□□ -0.03
HOXC12P31275 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HOXC12P31275 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC14.89□□□□□ -0.03
HOXC12P31275 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HOXC12P31275 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HOXC12P31275 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC14.89□□□□□ -0.03
HOXC12P31275 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HOXC12P31275 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.89□□□□□ -0.03
HOXC12P31275 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HOXC12P31275 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HOXC12P31275 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HOXC12P31275 LINC02012-201ENST00000608206 1725 ntBASIC14.89□□□□□ -0.03
HOXC12P31275 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HOXC12P31275 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.88□□□□□ -0.03
HOXC12P31275 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HOXC12P31275 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
HOXC12P31275 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HOXC12P31275 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.88□□□□□ -0.03
HOXC12P31275 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HOXC12P31275 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HOXC12P31275 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HOXC12P31275 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC14.88□□□□□ -0.03
HOXC12P31275 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.88□□□□□ -0.03
HOXC12P31275 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HOXC12P31275 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HOXC12P31275 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
HOXC12P31275 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HOXC12P31275 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.88□□□□□ -0.03
HOXC12P31275 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.88□□□□□ -0.03
HOXC12P31275 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.88□□□□□ -0.03
HOXC12P31275 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.88□□□□□ -0.03
HOXC12P31275 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HOXC12P31275 AC018845.2-201ENST00000568326 409 ntBASIC14.88□□□□□ -0.03
HOXC12P31275 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.88□□□□□ -0.03
HOXC12P31275 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
HOXC12P31275 AC027612.4-201ENST00000605371 583 ntBASIC14.88□□□□□ -0.03
HOXC12P31275 AL096865.1-201ENST00000606796 927 ntBASIC14.88□□□□□ -0.03
HOXC12P31275 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HOXC12P31275 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.88□□□□□ -0.03
HOXC12P31275 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HOXC12P31275 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HOXC12P31275 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.88□□□□□ -0.03
HOXC12P31275 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
HOXC12P31275 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.88□□□□□ -0.03
HOXC12P31275 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HOXC12P31275 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms