Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP8P22894 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.6■□□□□ 0.41
MMP8P22894 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MMP8P22894 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
MMP8P22894 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MMP8P22894 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP8P22894 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP8P22894 PCDH8P1-201ENST00000428983 2773 ntBASIC17.6■□□□□ 0.41
MMP8P22894 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.6■□□□□ 0.41
MMP8P22894 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
MMP8P22894 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.6■□□□□ 0.41
MMP8P22894 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
MMP8P22894 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP8P22894 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP8P22894 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP8P22894 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP8P22894 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP8P22894 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.59■□□□□ 0.41
MMP8P22894 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP8P22894 TNRC18P3-201ENST00000441896 2691 ntBASIC17.59■□□□□ 0.41
MMP8P22894 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP8P22894 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.59■□□□□ 0.41
MMP8P22894 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP8P22894 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MMP8P22894 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP8P22894 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.59■□□□□ 0.41
MMP8P22894 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP8P22894 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP8P22894 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
MMP8P22894 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.59■□□□□ 0.41
MMP8P22894 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP8P22894 IL9RP2-201ENST00000423948 1312 ntBASIC17.59■□□□□ 0.41
MMP8P22894 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MMP8P22894 RNU1-129P-201ENST00000384064 167 ntBASIC17.59■□□□□ 0.41
MMP8P22894 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.59■□□□□ 0.41
MMP8P22894 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
MMP8P22894 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.59■□□□□ 0.41
MMP8P22894 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.59■□□□□ 0.41
MMP8P22894 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP8P22894 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP8P22894 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.59■□□□□ 0.41
MMP8P22894 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.59■□□□□ 0.41
MMP8P22894 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.59■□□□□ 0.41
MMP8P22894 AL031432.2-201ENST00000566714 459 ntBASIC17.59■□□□□ 0.41
MMP8P22894 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.59■□□□□ 0.41
MMP8P22894 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.59■□□□□ 0.41
MMP8P22894 AL928711.1-201ENST00000570165 459 ntBASIC17.59■□□□□ 0.41
MMP8P22894 U1.21-201ENST00000580816 167 ntBASIC17.59■□□□□ 0.41
MMP8P22894 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.59■□□□□ 0.41
MMP8P22894 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP8P22894 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.59■□□□□ 0.41
MMP8P22894 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.59■□□□□ 0.41
MMP8P22894 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
MMP8P22894 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MMP8P22894 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP8P22894 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MMP8P22894 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MMP8P22894 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP8P22894 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MMP8P22894 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.59■□□□□ 0.41
MMP8P22894 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MMP8P22894 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MMP8P22894 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MMP8P22894 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.58■□□□□ 0.41
MMP8P22894 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
MMP8P22894 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
MMP8P22894 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MMP8P22894 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.58■□□□□ 0.41
MMP8P22894 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
MMP8P22894 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MMP8P22894 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
MMP8P22894 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP8P22894 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP8P22894 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
MMP8P22894 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.58■□□□□ 0.4
MMP8P22894 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.58■□□□□ 0.4
MMP8P22894 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP8P22894 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
MMP8P22894 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.58■□□□□ 0.4
MMP8P22894 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP8P22894 RPL13AP23-201ENST00000480739 586 ntBASIC17.58■□□□□ 0.4
MMP8P22894 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.58■□□□□ 0.4
MMP8P22894 MIR3909-201ENST00000579518 119 ntBASIC17.58■□□□□ 0.4
MMP8P22894 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.58■□□□□ 0.4
MMP8P22894 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP8P22894 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP8P22894 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP8P22894 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP8P22894 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
MMP8P22894 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.57■□□□□ 0.4
MMP8P22894 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP8P22894 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
MMP8P22894 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
MMP8P22894 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP8P22894 DOC2GP-204ENST00000639052 2548 ntBASIC17.57■□□□□ 0.4
MMP8P22894 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
MMP8P22894 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.57■□□□□ 0.4
MMP8P22894 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP8P22894 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
MMP8P22894 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms