Protein–RNA interactions for Protein: A6NJU9

NPIPB13, Nuclear pore complex-interacting protein family member B13, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB13A6NJU9 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB13A6NJU9 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB13A6NJU9 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB13A6NJU9 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 HMGA1P7-201ENST00000406908 502 ntBASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 CRYGEP-201ENST00000412192 528 ntBASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 RHOQP3-201ENST00000437982 621 ntBASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 RNA5SP415-201ENST00000517246 115 ntBASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 AC109635.5-201ENST00000533593 962 ntBASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 AL031055.1-201ENST00000606362 631 ntBASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 HLA-A-201ENST00000376802 1334 ntBASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.81□□□□□ -0.04
NPIPB13A6NJU9 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 AC145285.3-201ENST00000564603 959 ntBASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.8□□□□□ -0.04
NPIPB13A6NJU9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPB13A6NJU9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPB13A6NJU9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPB13A6NJU9 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPB13A6NJU9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPB13A6NJU9 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NPIPB13A6NJU9 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPB13A6NJU9 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.79□□□□□ -0.04
NPIPB13A6NJU9 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
NPIPB13A6NJU9 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPB13A6NJU9 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.79□□□□□ -0.04
NPIPB13A6NJU9 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NPIPB13A6NJU9 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms