Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CTAGE9A4FU28 AC011558.1-201ENST00000623459 338 ntBASIC17.97■□□□□ 0.47
CTAGE9A4FU28 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTAGE9A4FU28 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTAGE9A4FU28 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CTAGE9A4FU28 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTAGE9A4FU28 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTAGE9A4FU28 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.97■□□□□ 0.47
CTAGE9A4FU28 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.97■□□□□ 0.47
CTAGE9A4FU28 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTAGE9A4FU28 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CTAGE9A4FU28 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.97■□□□□ 0.47
CTAGE9A4FU28 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CTAGE9A4FU28 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CTAGE9A4FU28 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 AC132938.5-201ENST00000624980 1813 ntBASIC17.96■□□□□ 0.47
CTAGE9A4FU28 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 AC005521.1-201ENST00000393351 872 ntBASIC17.96■□□□□ 0.47
CTAGE9A4FU28 KLF4P1-201ENST00000412782 1185 ntBASIC17.96■□□□□ 0.47
CTAGE9A4FU28 YBX1P2-201ENST00000489612 999 ntBASIC17.96■□□□□ 0.47
CTAGE9A4FU28 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CTAGE9A4FU28 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.46
CTAGE9A4FU28 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CTAGE9A4FU28 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.96■□□□□ 0.46
CTAGE9A4FU28 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
CTAGE9A4FU28 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
CTAGE9A4FU28 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 GGT4P-201ENST00000623672 1708 ntBASIC17.95■□□□□ 0.46
CTAGE9A4FU28 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 AC211429.1-201ENST00000415277 523 ntBASIC17.95■□□□□ 0.46
CTAGE9A4FU28 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 AL139011.1-202ENST00000642063 584 ntBASIC17.95■□□□□ 0.46
CTAGE9A4FU28 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 NORAD-201ENST00000565493 5339 ntBASIC17.95■□□□□ 0.46
CTAGE9A4FU28 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CTAGE9A4FU28 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
CTAGE9A4FU28 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTAGE9A4FU28 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.94■□□□□ 0.46
CTAGE9A4FU28 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTAGE9A4FU28 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CTAGE9A4FU28 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTAGE9A4FU28 AC002310.6-201ENST00000624451 1377 ntBASIC17.94■□□□□ 0.46
CTAGE9A4FU28 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.94■□□□□ 0.46
CTAGE9A4FU28 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTAGE9A4FU28 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CTAGE9A4FU28 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms