Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 KRT19P2-202ENST00000557173 1012 ntBASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 SNHG9-202ENST00000564014 471 ntBASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 CYP2A7P1-201ENST00000595391 815 ntBASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 AL513190.1-201ENST00000621254 727 ntBASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 AL645728.2-201ENST00000641974 660 ntBASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 AC092865.6-201ENST00000642101 219 ntBASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.97■□□□□ 0.31
RAI2Q9Y5P3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 HMGA1P7-201ENST00000406908 502 ntBASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 AL031432.2-201ENST00000566714 459 ntBASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 AL928711.1-201ENST00000570165 459 ntBASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 AL603756.1-201ENST00000606511 2163 ntBASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RAI2Q9Y5P3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.3
RAI2Q9Y5P3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RAI2Q9Y5P3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.96■□□□□ 0.3
RAI2Q9Y5P3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 AL645939.2-201ENST00000427340 991 ntBASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms