Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZC3H4Q9UPT8 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC20.13■□□□□ 0.81
ZC3H4Q9UPT8 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.13■□□□□ 0.81
ZC3H4Q9UPT8 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
ZC3H4Q9UPT8 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC20.13■□□□□ 0.81
ZC3H4Q9UPT8 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
ZC3H4Q9UPT8 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC20.13■□□□□ 0.81
ZC3H4Q9UPT8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
ZC3H4Q9UPT8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.13■□□□□ 0.81
ZC3H4Q9UPT8 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
ZC3H4Q9UPT8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZC3H4Q9UPT8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZC3H4Q9UPT8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
ZC3H4Q9UPT8 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
ZC3H4Q9UPT8 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZC3H4Q9UPT8 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZC3H4Q9UPT8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.13■□□□□ 0.81
ZC3H4Q9UPT8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
ZC3H4Q9UPT8 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.13■□□□□ 0.81
ZC3H4Q9UPT8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZC3H4Q9UPT8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.13■□□□□ 0.81
ZC3H4Q9UPT8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZC3H4Q9UPT8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ZC3H4Q9UPT8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 AC098859.1-201ENST00000502915 1238 ntBASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 MPDU1-223ENST00000582151 728 ntBASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ZC3H4Q9UPT8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 TPI1-206ENST00000488464 791 ntTSL 5 BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 USB1-203ENST00000539737 1212 ntTSL 2 BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 AC244093.1-201ENST00000610837 814 ntBASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 LINC00896-202ENST00000609602 2128 ntBASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ZC3H4Q9UPT8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.1■□□□□ 0.81
ZC3H4Q9UPT8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H4Q9UPT8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H4Q9UPT8 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H4Q9UPT8 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC20.1■□□□□ 0.81
ZC3H4Q9UPT8 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H4Q9UPT8 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC20.1■□□□□ 0.81
ZC3H4Q9UPT8 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H4Q9UPT8 WFDC1-204ENST00000613603 549 ntBASIC20.1■□□□□ 0.81
ZC3H4Q9UPT8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H4Q9UPT8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H4Q9UPT8 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC20.1■□□□□ 0.81
ZC3H4Q9UPT8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.1■□□□□ 0.81
ZC3H4Q9UPT8 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H4Q9UPT8 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H4Q9UPT8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ZC3H4Q9UPT8 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms