Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 KRT223P-202ENST00000449164 1292 ntBASIC16.6■□□□□ 0.25
NCDNQ9UBB6 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 AP005482.1-201ENST00000563722 1273 ntBASIC16.6■□□□□ 0.25
NCDNQ9UBB6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 AC099568.2-201ENST00000609194 695 ntBASIC16.6■□□□□ 0.25
NCDNQ9UBB6 TEX28P1-201ENST00000613479 1221 ntBASIC16.6■□□□□ 0.25
NCDNQ9UBB6 TEX28P2-201ENST00000617764 1221 ntBASIC16.6■□□□□ 0.25
NCDNQ9UBB6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCDNQ9UBB6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 AC008764.6-201ENST00000595909 2069 ntBASIC16.59■□□□□ 0.25
NCDNQ9UBB6 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 HAUS4P1-201ENST00000406739 1145 ntBASIC16.59■□□□□ 0.25
NCDNQ9UBB6 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 HCG4-201ENST00000418983 998 ntBASIC16.59■□□□□ 0.25
NCDNQ9UBB6 AL353705.2-201ENST00000428243 662 ntBASIC16.59■□□□□ 0.25
NCDNQ9UBB6 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.59■□□□□ 0.25
NCDNQ9UBB6 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 WASH4P-201ENST00000564273 1246 ntBASIC16.59■□□□□ 0.25
NCDNQ9UBB6 AL512343.1-201ENST00000605837 169 ntBASIC16.59■□□□□ 0.25
NCDNQ9UBB6 AL589739.1-201ENST00000607720 493 ntBASIC16.59■□□□□ 0.25
NCDNQ9UBB6 SPTSSB-204ENST00000617024 1292 ntBASIC16.59■□□□□ 0.25
NCDNQ9UBB6 AC007431.3-201ENST00000623221 587 ntBASIC16.59■□□□□ 0.25
NCDNQ9UBB6 AC004840.1-201ENST00000636359 365 ntBASIC16.59■□□□□ 0.25
NCDNQ9UBB6 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NCDNQ9UBB6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NCDNQ9UBB6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
NCDNQ9UBB6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.25
NCDNQ9UBB6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NCDNQ9UBB6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.58■□□□□ 0.25
NCDNQ9UBB6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
NCDNQ9UBB6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NCDNQ9UBB6 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 RNU1-129P-201ENST00000384064 167 ntBASIC16.58■□□□□ 0.24
NCDNQ9UBB6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 BCYRN1-201ENST00000418539 200 ntBASIC16.58■□□□□ 0.24
NCDNQ9UBB6 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.58■□□□□ 0.24
NCDNQ9UBB6 AC105233.2-201ENST00000523697 349 ntBASIC16.58■□□□□ 0.24
NCDNQ9UBB6 AF228730.5-201ENST00000530288 346 ntBASIC16.58■□□□□ 0.24
NCDNQ9UBB6 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 218.1 ms