Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD248Q9HCU0 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD248Q9HCU0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD248Q9HCU0 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD248Q9HCU0 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD248Q9HCU0 AC023274.1-201ENST00000418278 595 ntBASIC17.72■□□□□ 0.43
CD248Q9HCU0 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.72■□□□□ 0.43
CD248Q9HCU0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.72■□□□□ 0.43
CD248Q9HCU0 DNAJB3-201ENST00000446806 729 ntBASIC17.72■□□□□ 0.43
CD248Q9HCU0 AC002347.1-201ENST00000569543 541 ntBASIC17.72■□□□□ 0.43
CD248Q9HCU0 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD248Q9HCU0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD248Q9HCU0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD248Q9HCU0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.72■□□□□ 0.43
CD248Q9HCU0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CD248Q9HCU0 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
CD248Q9HCU0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD248Q9HCU0 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD248Q9HCU0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CD248Q9HCU0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.72■□□□□ 0.43
CD248Q9HCU0 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD248Q9HCU0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD248Q9HCU0 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CD248Q9HCU0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD248Q9HCU0 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
CD248Q9HCU0 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD248Q9HCU0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CD248Q9HCU0 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD248Q9HCU0 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.71■□□□□ 0.43
CD248Q9HCU0 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CD248Q9HCU0 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD248Q9HCU0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.71■□□□□ 0.43
CD248Q9HCU0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.71■□□□□ 0.43
CD248Q9HCU0 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD248Q9HCU0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD248Q9HCU0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.71■□□□□ 0.43
CD248Q9HCU0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD248Q9HCU0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.71■□□□□ 0.43
CD248Q9HCU0 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
CD248Q9HCU0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.71■□□□□ 0.43
CD248Q9HCU0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.71■□□□□ 0.43
CD248Q9HCU0 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.71■□□□□ 0.43
CD248Q9HCU0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.71■□□□□ 0.43
CD248Q9HCU0 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.71■□□□□ 0.43
CD248Q9HCU0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.71■□□□□ 0.43
CD248Q9HCU0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
CD248Q9HCU0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.71■□□□□ 0.43
CD248Q9HCU0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.71■□□□□ 0.43
CD248Q9HCU0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.71■□□□□ 0.43
CD248Q9HCU0 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD248Q9HCU0 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
CD248Q9HCU0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD248Q9HCU0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD248Q9HCU0 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD248Q9HCU0 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CD248Q9HCU0 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD248Q9HCU0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CD248Q9HCU0 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CD248Q9HCU0 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.71■□□□□ 0.43
CD248Q9HCU0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CD248Q9HCU0 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
CD248Q9HCU0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.71■□□□□ 0.42
CD248Q9HCU0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.71■□□□□ 0.42
CD248Q9HCU0 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD248Q9HCU0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CD248Q9HCU0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD248Q9HCU0 AL603756.1-201ENST00000606511 2163 ntBASIC17.7■□□□□ 0.42
CD248Q9HCU0 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD248Q9HCU0 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CD248Q9HCU0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.7■□□□□ 0.42
CD248Q9HCU0 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CD248Q9HCU0 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CD248Q9HCU0 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD248Q9HCU0 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.7■□□□□ 0.42
CD248Q9HCU0 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD248Q9HCU0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.7■□□□□ 0.42
CD248Q9HCU0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD248Q9HCU0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD248Q9HCU0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD248Q9HCU0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.7■□□□□ 0.42
CD248Q9HCU0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CD248Q9HCU0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CD248Q9HCU0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.7■□□□□ 0.42
CD248Q9HCU0 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.7■□□□□ 0.42
CD248Q9HCU0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.7■□□□□ 0.42
CD248Q9HCU0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD248Q9HCU0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CD248Q9HCU0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.7■□□□□ 0.42
CD248Q9HCU0 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.7■□□□□ 0.42
CD248Q9HCU0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.7■□□□□ 0.42
CD248Q9HCU0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.7■□□□□ 0.42
CD248Q9HCU0 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.7■□□□□ 0.42
CD248Q9HCU0 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.7■□□□□ 0.42
CD248Q9HCU0 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CD248Q9HCU0 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CD248Q9HCU0 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CD248Q9HCU0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.7■□□□□ 0.42
CD248Q9HCU0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CD248Q9HCU0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CD248Q9HCU0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms