Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CHD8Q9HCK8 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CHD8Q9HCK8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHD8Q9HCK8 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHD8Q9HCK8 RN7SL399P-201ENST00000471648 279 ntBASIC15.33■□□□□ 0.05
CHD8Q9HCK8 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.33■□□□□ 0.05
CHD8Q9HCK8 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.33■□□□□ 0.05
CHD8Q9HCK8 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC15.33■□□□□ 0.05
CHD8Q9HCK8 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.33■□□□□ 0.05
CHD8Q9HCK8 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
CHD8Q9HCK8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHD8Q9HCK8 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CHD8Q9HCK8 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.33■□□□□ 0.05
CHD8Q9HCK8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.33■□□□□ 0.05
CHD8Q9HCK8 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 FTH1P14-201ENST00000482930 551 ntBASIC15.33■□□□□ 0.04
CHD8Q9HCK8 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.33■□□□□ 0.04
CHD8Q9HCK8 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHD8Q9HCK8 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHD8Q9HCK8 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHD8Q9HCK8 RHOXF1P1-202ENST00000635473 501 ntBASIC15.32■□□□□ 0.04
CHD8Q9HCK8 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHD8Q9HCK8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHD8Q9HCK8 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHD8Q9HCK8 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.32■□□□□ 0.04
CHD8Q9HCK8 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHD8Q9HCK8 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHD8Q9HCK8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.32■□□□□ 0.04
CHD8Q9HCK8 AC073592.3-201ENST00000625118 1834 ntBASIC15.32■□□□□ 0.04
CHD8Q9HCK8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHD8Q9HCK8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHD8Q9HCK8 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHD8Q9HCK8 AC016694.1-201ENST00000434179 700 ntBASIC15.32■□□□□ 0.04
CHD8Q9HCK8 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC15.32■□□□□ 0.04
CHD8Q9HCK8 IQSEC3P1-201ENST00000538799 536 ntBASIC15.32■□□□□ 0.04
CHD8Q9HCK8 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHD8Q9HCK8 AP006547.1-201ENST00000563435 692 ntBASIC15.32■□□□□ 0.04
CHD8Q9HCK8 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHD8Q9HCK8 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.32■□□□□ 0.04
CHD8Q9HCK8 CYP2A7P1-201ENST00000595391 815 ntBASIC15.32■□□□□ 0.04
CHD8Q9HCK8 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.32■□□□□ 0.04
CHD8Q9HCK8 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.32■□□□□ 0.04
CHD8Q9HCK8 AC005332.7-201ENST00000614046 2005 ntBASIC15.32■□□□□ 0.04
CHD8Q9HCK8 AP001350.2-201ENST00000625104 1094 ntBASIC15.32■□□□□ 0.04
CHD8Q9HCK8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHD8Q9HCK8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CHD8Q9HCK8 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
CHD8Q9HCK8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC15.32■□□□□ 0.04
CHD8Q9HCK8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CHD8Q9HCK8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CHD8Q9HCK8 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHD8Q9HCK8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms