Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.07□□□□□ -0.16
CCL13Q99616 SLC22A20-204ENST00000530038 1673 ntBASIC14.07□□□□□ -0.16
CCL13Q99616 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL13Q99616 AC131009.4-201ENST00000624048 1740 ntBASIC14.07□□□□□ -0.16
CCL13Q99616 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL13Q99616 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL13Q99616 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCL13Q99616 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL13Q99616 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL13Q99616 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL13Q99616 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
CCL13Q99616 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.07□□□□□ -0.16
CCL13Q99616 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.07□□□□□ -0.16
CCL13Q99616 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL13Q99616 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL13Q99616 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.07□□□□□ -0.16
CCL13Q99616 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.07□□□□□ -0.16
CCL13Q99616 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.07□□□□□ -0.16
CCL13Q99616 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL13Q99616 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
CCL13Q99616 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.07□□□□□ -0.16
CCL13Q99616 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.07□□□□□ -0.16
CCL13Q99616 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CCL13Q99616 AC004877.2-201ENST00000623941 599 ntBASIC14.07□□□□□ -0.16
CCL13Q99616 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL13Q99616 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL13Q99616 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL13Q99616 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL13Q99616 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL13Q99616 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL13Q99616 FER1L4-210ENST00000615531 5998 ntBASIC14.07□□□□□ -0.16
CCL13Q99616 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CCL13Q99616 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL13Q99616 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL13Q99616 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL13Q99616 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL13Q99616 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL13Q99616 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL13Q99616 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC14.07□□□□□ -0.16
CCL13Q99616 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCL13Q99616 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.07□□□□□ -0.16
CCL13Q99616 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCL13Q99616 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL13Q99616 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL13Q99616 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL13Q99616 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCL13Q99616 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCL13Q99616 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL13Q99616 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCL13Q99616 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC14.06□□□□□ -0.16
CCL13Q99616 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC14.06□□□□□ -0.16
CCL13Q99616 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCL13Q99616 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CCL13Q99616 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CCL13Q99616 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCL13Q99616 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CCL13Q99616 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.06□□□□□ -0.16
CCL13Q99616 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.06□□□□□ -0.16
CCL13Q99616 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.06□□□□□ -0.16
CCL13Q99616 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.06□□□□□ -0.16
CCL13Q99616 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL13Q99616 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL13Q99616 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.06□□□□□ -0.16
CCL13Q99616 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.06□□□□□ -0.16
CCL13Q99616 AC023141.13-201ENST00000604991 943 ntBASIC14.06□□□□□ -0.16
CCL13Q99616 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.06□□□□□ -0.16
CCL13Q99616 AC007064.4-201ENST00000637740 555 ntBASIC14.06□□□□□ -0.16
CCL13Q99616 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL13Q99616 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC14.06□□□□□ -0.16
CCL13Q99616 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL13Q99616 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL13Q99616 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL13Q99616 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCL13Q99616 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
CCL13Q99616 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CCL13Q99616 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL13Q99616 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
CCL13Q99616 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CCL13Q99616 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CCL13Q99616 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.06□□□□□ -0.16
CCL13Q99616 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.06□□□□□ -0.16
CCL13Q99616 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.06□□□□□ -0.16
CCL13Q99616 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 AC012569.1-201ENST00000591191 1524 ntBASIC14.05□□□□□ -0.16
CCL13Q99616 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.05□□□□□ -0.16
CCL13Q99616 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CCL13Q99616 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.05□□□□□ -0.16
CCL13Q99616 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CCL13Q99616 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 AC006277.1-201ENST00000624348 1610 ntBASIC14.05□□□□□ -0.16
CCL13Q99616 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.05□□□□□ -0.16
CCL13Q99616 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 PRORSD1P-202ENST00000563365 2154 ntBASIC14.05□□□□□ -0.16
CCL13Q99616 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCL13Q99616 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.05□□□□□ -0.16
CCL13Q99616 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms