Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.12□□□□□ -0.31
TRGV9Q99603 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV9Q99603 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV9Q99603 PKD1P5-201ENST00000532415 10291 ntBASIC13.12□□□□□ -0.31
TRGV9Q99603 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV9Q99603 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV9Q99603 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV9Q99603 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV9Q99603 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TRGV9Q99603 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV9Q99603 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV9Q99603 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV9Q99603 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TRGV9Q99603 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TRGV9Q99603 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV9Q99603 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.12□□□□□ -0.31
TRGV9Q99603 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV9Q99603 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV9Q99603 MIR3180-1-201ENST00000580374 94 ntBASIC13.12□□□□□ -0.31
TRGV9Q99603 MIR3180-3-201ENST00000584616 94 ntBASIC13.12□□□□□ -0.31
TRGV9Q99603 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.12□□□□□ -0.31
TRGV9Q99603 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
TRGV9Q99603 AC099336.1-202ENST00000602961 463 ntBASIC13.12□□□□□ -0.31
TRGV9Q99603 AL591684.3-201ENST00000605187 298 ntBASIC13.12□□□□□ -0.31
TRGV9Q99603 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
TRGV9Q99603 AL590326.2-201ENST00000625139 305 ntBASIC13.12□□□□□ -0.31
TRGV9Q99603 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV9Q99603 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV9Q99603 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV9Q99603 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV9Q99603 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV9Q99603 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TRGV9Q99603 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV9Q99603 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.12□□□□□ -0.31
TRGV9Q99603 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV9Q99603 AP005117.1-201ENST00000584346 1413 ntBASIC13.12□□□□□ -0.31
TRGV9Q99603 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.12□□□□□ -0.31
TRGV9Q99603 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV9Q99603 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV9Q99603 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
TRGV9Q99603 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV9Q99603 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRGV9Q99603 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.12□□□□□ -0.31
TRGV9Q99603 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.12□□□□□ -0.31
TRGV9Q99603 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV9Q99603 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.11□□□□□ -0.31
TRGV9Q99603 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.11□□□□□ -0.31
TRGV9Q99603 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV9Q99603 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRGV9Q99603 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC13.11□□□□□ -0.31
TRGV9Q99603 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV9Q99603 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.11□□□□□ -0.31
TRGV9Q99603 AC007950.2-201ENST00000615045 2347 ntBASIC13.11□□□□□ -0.31
TRGV9Q99603 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TRGV9Q99603 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV9Q99603 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.11□□□□□ -0.31
TRGV9Q99603 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRGV9Q99603 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.11□□□□□ -0.31
TRGV9Q99603 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV9Q99603 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV9Q99603 NUS1P2-201ENST00000417358 873 ntBASIC13.11□□□□□ -0.31
TRGV9Q99603 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC13.11□□□□□ -0.31
TRGV9Q99603 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV9Q99603 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV9Q99603 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.11□□□□□ -0.31
TRGV9Q99603 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
TRGV9Q99603 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
TRGV9Q99603 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TRGV9Q99603 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV9Q99603 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC13.11□□□□□ -0.31
TRGV9Q99603 AL022326.1-202ENST00000641533 845 ntBASIC13.11□□□□□ -0.31
TRGV9Q99603 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV9Q99603 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV9Q99603 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC13.11□□□□□ -0.31
TRGV9Q99603 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.11□□□□□ -0.31
TRGV9Q99603 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.11□□□□□ -0.31
TRGV9Q99603 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
TRGV9Q99603 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV9Q99603 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV9Q99603 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV9Q99603 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV9Q99603 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.11□□□□□ -0.31
TRGV9Q99603 AL365203.3-201ENST00000609742 2057 ntBASIC13.11□□□□□ -0.31
TRGV9Q99603 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC13.11□□□□□ -0.31
TRGV9Q99603 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV9Q99603 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.11□□□□□ -0.31
TRGV9Q99603 CICP6-201ENST00000457191 2729 ntBASIC13.11□□□□□ -0.31
TRGV9Q99603 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
TRGV9Q99603 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TRGV9Q99603 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV9Q99603 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TRGV9Q99603 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TRGV9Q99603 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV9Q99603 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.1□□□□□ -0.31
TRGV9Q99603 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV9Q99603 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV9Q99603 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV9Q99603 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
TRGV9Q99603 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TRGV9Q99603 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms