Protein–RNA interactions for Protein: Q96EX1

SMIM12, Small integral membrane protein 12, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12Q96EX1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM12Q96EX1 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SMIM12Q96EX1 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM12Q96EX1 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SMIM12Q96EX1 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.84□□□□□ -0.35
SMIM12Q96EX1 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 PAUPAR-201ENST00000630360 2965 ntBASIC12.84□□□□□ -0.35
SMIM12Q96EX1 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 AL021920.2-201ENST00000624828 1351 ntBASIC12.84□□□□□ -0.35
SMIM12Q96EX1 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 RBM17P1-201ENST00000453646 1190 ntBASIC12.84□□□□□ -0.35
SMIM12Q96EX1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 AP003733.1-201ENST00000491725 852 ntBASIC12.84□□□□□ -0.35
SMIM12Q96EX1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 AL603832.2-201ENST00000566195 2125 ntBASIC12.84□□□□□ -0.35
SMIM12Q96EX1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 STK25P1-201ENST00000585406 838 ntBASIC12.84□□□□□ -0.35
SMIM12Q96EX1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 AL136038.4-201ENST00000603606 1261 ntBASIC12.84□□□□□ -0.35
SMIM12Q96EX1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 AL049637.2-201ENST00000641778 930 ntBASIC12.84□□□□□ -0.35
SMIM12Q96EX1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.84□□□□□ -0.35
SMIM12Q96EX1 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
SMIM12Q96EX1 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
SMIM12Q96EX1 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
SMIM12Q96EX1 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.83□□□□□ -0.35
SMIM12Q96EX1 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
SMIM12Q96EX1 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM12Q96EX1 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SMIM12Q96EX1 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM12Q96EX1 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM12Q96EX1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM12Q96EX1 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.83□□□□□ -0.36
SMIM12Q96EX1 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM12Q96EX1 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM12Q96EX1 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC12.83□□□□□ -0.36
SMIM12Q96EX1 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms