Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCE1Q969G3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.97■□□□□ 0.63
SMARCE1Q969G3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCE1Q969G3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SMARCE1Q969G3 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCE1Q969G3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCE1Q969G3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.97■□□□□ 0.63
SMARCE1Q969G3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SMARCE1Q969G3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCE1Q969G3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCE1Q969G3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.97■□□□□ 0.63
SMARCE1Q969G3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.97■□□□□ 0.63
SMARCE1Q969G3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.97■□□□□ 0.63
SMARCE1Q969G3 TERC-201ENST00000602385 541 ntBASIC18.97■□□□□ 0.63
SMARCE1Q969G3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.97■□□□□ 0.63
SMARCE1Q969G3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.97■□□□□ 0.63
SMARCE1Q969G3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.97■□□□□ 0.63
SMARCE1Q969G3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCE1Q969G3 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCE1Q969G3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCE1Q969G3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SMARCE1Q969G3 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCE1Q969G3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SMARCE1Q969G3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCE1Q969G3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCE1Q969G3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.97■□□□□ 0.63
SMARCE1Q969G3 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
SMARCE1Q969G3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 HLA-J-202ENST00000469281 1241 ntBASIC18.96■□□□□ 0.63
SMARCE1Q969G3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 KRT18P35-201ENST00000510488 1269 ntBASIC18.96■□□□□ 0.63
SMARCE1Q969G3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.96■□□□□ 0.63
SMARCE1Q969G3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.96■□□□□ 0.63
SMARCE1Q969G3 AC092850.2-201ENST00000623821 2697 ntBASIC18.96■□□□□ 0.63
SMARCE1Q969G3 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 AC006538.1-201ENST00000567905 1585 ntBASIC18.95■□□□□ 0.62
SMARCE1Q969G3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 NCF1C-201ENST00000438382 1427 ntBASIC18.95■□□□□ 0.62
SMARCE1Q969G3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 AC064862.7-201ENST00000604520 867 ntBASIC18.95■□□□□ 0.62
SMARCE1Q969G3 AC093458.2-201ENST00000623150 629 ntBASIC18.95■□□□□ 0.62
SMARCE1Q969G3 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMARCE1Q969G3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms