Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC4Q92889 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.11■□□□□ 0.65
ERCC4Q92889 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
ERCC4Q92889 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ERCC4Q92889 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.1■□□□□ 0.65
ERCC4Q92889 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
ERCC4Q92889 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC4Q92889 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC19.1■□□□□ 0.65
ERCC4Q92889 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC4Q92889 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC19.1■□□□□ 0.65
ERCC4Q92889 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
ERCC4Q92889 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ERCC4Q92889 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
ERCC4Q92889 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC4Q92889 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC4Q92889 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ERCC4Q92889 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
ERCC4Q92889 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC4Q92889 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC4Q92889 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC4Q92889 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.1■□□□□ 0.65
ERCC4Q92889 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.1■□□□□ 0.65
ERCC4Q92889 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.1■□□□□ 0.65
ERCC4Q92889 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC19.1■□□□□ 0.65
ERCC4Q92889 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.1■□□□□ 0.65
ERCC4Q92889 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.1■□□□□ 0.65
ERCC4Q92889 ACTG1P4-201ENST00000425123 1122 ntBASIC19.1■□□□□ 0.65
ERCC4Q92889 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC4Q92889 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.1■□□□□ 0.65
ERCC4Q92889 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
ERCC4Q92889 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC4Q92889 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC4Q92889 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC4Q92889 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC4Q92889 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC4Q92889 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
ERCC4Q92889 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ERCC4Q92889 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC4Q92889 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC4Q92889 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC4Q92889 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC4Q92889 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC4Q92889 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ERCC4Q92889 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.09■□□□□ 0.65
ERCC4Q92889 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC4Q92889 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
ERCC4Q92889 MYB-201ENST00000316528 3571 ntTSL 5 BASIC19.09■□□□□ 0.65
ERCC4Q92889 MYB-241ENST00000616088 3573 ntTSL 5 BASIC19.09■□□□□ 0.65
ERCC4Q92889 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
ERCC4Q92889 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC4Q92889 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC4Q92889 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC4Q92889 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC4Q92889 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.09■□□□□ 0.65
ERCC4Q92889 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
ERCC4Q92889 AC104819.1-201ENST00000504587 486 ntBASIC19.09■□□□□ 0.65
ERCC4Q92889 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC4Q92889 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.09■□□□□ 0.65
ERCC4Q92889 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.09■□□□□ 0.65
ERCC4Q92889 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.09■□□□□ 0.65
ERCC4Q92889 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC4Q92889 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
ERCC4Q92889 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.09■□□□□ 0.65
ERCC4Q92889 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC4Q92889 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC19.09■□□□□ 0.65
ERCC4Q92889 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
ERCC4Q92889 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.09■□□□□ 0.65
ERCC4Q92889 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.09■□□□□ 0.65
ERCC4Q92889 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC4Q92889 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ERCC4Q92889 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ERCC4Q92889 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC4Q92889 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC4Q92889 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC4Q92889 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC4Q92889 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ERCC4Q92889 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
ERCC4Q92889 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC4Q92889 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC4Q92889 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC4Q92889 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.08■□□□□ 0.64
ERCC4Q92889 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC4Q92889 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC4Q92889 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC4Q92889 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC4Q92889 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.08■□□□□ 0.64
ERCC4Q92889 BX005266.1-201ENST00000473402 457 ntBASIC19.08■□□□□ 0.64
ERCC4Q92889 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.08■□□□□ 0.64
ERCC4Q92889 MIR5100-201ENST00000579544 119 ntBASIC19.08■□□□□ 0.64
ERCC4Q92889 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.08■□□□□ 0.64
ERCC4Q92889 AC092329.2-201ENST00000598402 547 ntBASIC19.08■□□□□ 0.64
ERCC4Q92889 CCNC-219ENST00000627680 896 ntTSL 5 BASIC19.08■□□□□ 0.64
ERCC4Q92889 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.08■□□□□ 0.64
ERCC4Q92889 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
ERCC4Q92889 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC4Q92889 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC4Q92889 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
ERCC4Q92889 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ERCC4Q92889 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.08■□□□□ 0.64
ERCC4Q92889 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms