Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 AC113347.1-201ENST00000413321 391 ntBASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 AL359075.1-203ENST00000462729 1002 ntBASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 AC103702.1-201ENST00000548801 2630 ntBASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RAB3IL1Q8TBN0 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 HBZP1-201ENST00000354915 429 ntBASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
RAB3IL1Q8TBN0 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 Z83836.1-201ENST00000624605 1642 ntBASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 DUX4L17-201ENST00000557360 1267 ntBASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB3IL1Q8TBN0 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms