Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 OS9-205ENST00000413095 1660 ntTSL 2 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 PARL-206ENST00000435888 1098 ntTSL 5 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 AC097658.1-201ENST00000475555 843 ntBASIC8.5□□□□□ -1.05
LINC01554Q52M75 NME1-207ENST00000480143 964 ntTSL 2 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 AC083906.2-201ENST00000511578 360 ntBASIC8.5□□□□□ -1.05
LINC01554Q52M75 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 SOX15-203ENST00000570788 1093 ntBASIC8.5□□□□□ -1.05
LINC01554Q52M75 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 PFKL-212ENST00000628044 129 ntTSL 3 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 AC083906.6-201ENST00000641366 219 ntBASIC8.5□□□□□ -1.05
LINC01554Q52M75 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 CPEB3-202ENST00000412050 7664 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 CAMSAP1-202ENST00000389532 7696 ntAPPRIS P2 TSL 5 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 MECR-202ENST00000373791 2416 ntTSL 2 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
LINC01554Q52M75 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC8.5□□□□□ -1.05
LINC01554Q52M75 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC8.49□□□□□ -1.05
LINC01554Q52M75 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC8.49□□□□□ -1.05
LINC01554Q52M75 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC8.49□□□□□ -1.05
LINC01554Q52M75 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC8.49□□□□□ -1.05
LINC01554Q52M75 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LINC01554Q52M75 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC8.49□□□□□ -1.05
LINC01554Q52M75 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC8.49□□□□□ -1.05
LINC01554Q52M75 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
LINC01554Q52M75 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LINC01554Q52M75 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LINC01554Q52M75 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
LINC01554Q52M75 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LINC01554Q52M75 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LINC01554Q52M75 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LINC01554Q52M75 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
LINC01554Q52M75 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC8.49□□□□□ -1.05
LINC01554Q52M75 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LINC01554Q52M75 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC8.49□□□□□ -1.05
LINC01554Q52M75 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LINC01554Q52M75 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
LINC01554Q52M75 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
LINC01554Q52M75 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LINC01554Q52M75 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LINC01554Q52M75 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
LINC01554Q52M75 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
LINC01554Q52M75 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
LINC01554Q52M75 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC8.49□□□□□ -1.05
LINC01554Q52M75 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms