Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 GOLGA2P9-201ENST00000596977 1937 ntBASIC19.97■□□□□ 0.79
PDS5AQ29RF7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 MIR4453-201ENST00000584019 89 ntBASIC19.97■□□□□ 0.79
PDS5AQ29RF7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDS5AQ29RF7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PDS5AQ29RF7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDS5AQ29RF7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PDS5AQ29RF7 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDS5AQ29RF7 FO538757.1-201ENST00000623083 1397 ntBASIC19.96■□□□□ 0.79
PDS5AQ29RF7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDS5AQ29RF7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.96■□□□□ 0.79
PDS5AQ29RF7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDS5AQ29RF7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PDS5AQ29RF7 TREML5P-201ENST00000421694 576 ntBASIC19.96■□□□□ 0.79
PDS5AQ29RF7 AC092580.3-201ENST00000430932 139 ntBASIC19.96■□□□□ 0.79
PDS5AQ29RF7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.96■□□□□ 0.79
PDS5AQ29RF7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.96■□□□□ 0.79
PDS5AQ29RF7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.96■□□□□ 0.79
PDS5AQ29RF7 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.96■□□□□ 0.79
PDS5AQ29RF7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDS5AQ29RF7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDS5AQ29RF7 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PDS5AQ29RF7 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDS5AQ29RF7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDS5AQ29RF7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDS5AQ29RF7 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.96■□□□□ 0.79
PDS5AQ29RF7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDS5AQ29RF7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC19.96■□□□□ 0.79
PDS5AQ29RF7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDS5AQ29RF7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDS5AQ29RF7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDS5AQ29RF7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.95■□□□□ 0.78
PDS5AQ29RF7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDS5AQ29RF7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDS5AQ29RF7 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDS5AQ29RF7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PDS5AQ29RF7 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.95■□□□□ 0.78
PDS5AQ29RF7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDS5AQ29RF7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDS5AQ29RF7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.95■□□□□ 0.78
PDS5AQ29RF7 BASP1P1-201ENST00000430708 665 ntBASIC19.95■□□□□ 0.78
PDS5AQ29RF7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.95■□□□□ 0.78
PDS5AQ29RF7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDS5AQ29RF7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.95■□□□□ 0.78
PDS5AQ29RF7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.95■□□□□ 0.78
PDS5AQ29RF7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDS5AQ29RF7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDS5AQ29RF7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDS5AQ29RF7 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PDS5AQ29RF7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDS5AQ29RF7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.94■□□□□ 0.78
PDS5AQ29RF7 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC19.94■□□□□ 0.78
PDS5AQ29RF7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDS5AQ29RF7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PDS5AQ29RF7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.94■□□□□ 0.78
PDS5AQ29RF7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.94■□□□□ 0.78
PDS5AQ29RF7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.94■□□□□ 0.78
PDS5AQ29RF7 AL603756.1-201ENST00000606511 2163 ntBASIC19.94■□□□□ 0.78
PDS5AQ29RF7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.94■□□□□ 0.78
PDS5AQ29RF7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PDS5AQ29RF7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDS5AQ29RF7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDS5AQ29RF7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
PDS5AQ29RF7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.94■□□□□ 0.78
PDS5AQ29RF7 AC093214.1-201ENST00000511688 1107 ntBASIC19.94■□□□□ 0.78
PDS5AQ29RF7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.94■□□□□ 0.78
PDS5AQ29RF7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.94■□□□□ 0.78
PDS5AQ29RF7 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.94■□□□□ 0.78
PDS5AQ29RF7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.94■□□□□ 0.78
PDS5AQ29RF7 AC092364.2-202ENST00000597012 1073 ntBASIC19.94■□□□□ 0.78
PDS5AQ29RF7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDS5AQ29RF7 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDS5AQ29RF7 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDS5AQ29RF7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PDS5AQ29RF7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.94■□□□□ 0.78
PDS5AQ29RF7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDS5AQ29RF7 AL035456.1-201ENST00000456064 1369 ntBASIC19.93■□□□□ 0.78
PDS5AQ29RF7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms