Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.85□□□□□ -0.03
NKX6-1P78426 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.85□□□□□ -0.03
NKX6-1P78426 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
NKX6-1P78426 IGHV3-65-201ENST00000523210 341 ntBASIC14.85□□□□□ -0.03
NKX6-1P78426 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.85□□□□□ -0.03
NKX6-1P78426 AC008667.4-201ENST00000607370 168 ntBASIC14.85□□□□□ -0.03
NKX6-1P78426 AC004790.2-201ENST00000623588 572 ntBASIC14.85□□□□□ -0.03
NKX6-1P78426 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
NKX6-1P78426 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
NKX6-1P78426 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.85□□□□□ -0.03
NKX6-1P78426 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
NKX6-1P78426 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.85□□□□□ -0.03
NKX6-1P78426 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.85□□□□□ -0.03
NKX6-1P78426 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-1P78426 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NKX6-1P78426 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-1P78426 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-1P78426 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-1P78426 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-1P78426 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-1P78426 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX6-1P78426 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NKX6-1P78426 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-1P78426 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-1P78426 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.84□□□□□ -0.03
NKX6-1P78426 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
NKX6-1P78426 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-1P78426 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-1P78426 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-1P78426 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-1P78426 AP002414.1-201ENST00000391405 1147 ntBASIC14.84□□□□□ -0.03
NKX6-1P78426 PTCHD3P3-201ENST00000403073 906 ntBASIC14.84□□□□□ -0.03
NKX6-1P78426 TSEN15P1-201ENST00000423257 515 ntBASIC14.84□□□□□ -0.03
NKX6-1P78426 COX20P2-201ENST00000452636 358 ntBASIC14.84□□□□□ -0.03
NKX6-1P78426 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX6-1P78426 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.84□□□□□ -0.03
NKX6-1P78426 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
NKX6-1P78426 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.84□□□□□ -0.03
NKX6-1P78426 SPCS2P1-201ENST00000561636 679 ntBASIC14.84□□□□□ -0.03
NKX6-1P78426 AC004449.1-201ENST00000564240 433 ntBASIC14.84□□□□□ -0.03
NKX6-1P78426 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.84□□□□□ -0.03
NKX6-1P78426 AC093028.1-201ENST00000622998 982 ntBASIC14.84□□□□□ -0.03
NKX6-1P78426 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.84□□□□□ -0.03
NKX6-1P78426 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-1P78426 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-1P78426 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
NKX6-1P78426 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-1P78426 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-1P78426 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-1P78426 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-1P78426 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.84□□□□□ -0.03
NKX6-1P78426 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-1P78426 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NKX6-1P78426 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-1P78426 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-1P78426 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.84□□□□□ -0.03
NKX6-1P78426 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-1P78426 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NKX6-1P78426 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-1P78426 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.84□□□□□ -0.03
NKX6-1P78426 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-1P78426 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NKX6-1P78426 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14.84□□□□□ -0.03
NKX6-1P78426 AC016396.2-201ENST00000562575 1417 ntBASIC14.83□□□□□ -0.03
NKX6-1P78426 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
NKX6-1P78426 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NKX6-1P78426 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
NKX6-1P78426 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
NKX6-1P78426 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NKX6-1P78426 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.83□□□□□ -0.03
NKX6-1P78426 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NKX6-1P78426 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
NKX6-1P78426 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
NKX6-1P78426 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
NKX6-1P78426 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX6-1P78426 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NKX6-1P78426 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.83□□□□□ -0.04
NKX6-1P78426 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX6-1P78426 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.83□□□□□ -0.04
NKX6-1P78426 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX6-1P78426 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX6-1P78426 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.83□□□□□ -0.04
NKX6-1P78426 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NKX6-1P78426 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NKX6-1P78426 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.83□□□□□ -0.04
NKX6-1P78426 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms