Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.55■□□□□ 0.4
HADHBP55084 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.55■□□□□ 0.4
HADHBP55084 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.55■□□□□ 0.4
HADHBP55084 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.55■□□□□ 0.4
HADHBP55084 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HADHBP55084 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HADHBP55084 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HADHBP55084 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HADHBP55084 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
HADHBP55084 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HADHBP55084 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HADHBP55084 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HADHBP55084 AC105917.1-201ENST00000506637 2539 ntBASIC17.55■□□□□ 0.4
HADHBP55084 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HADHBP55084 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HADHBP55084 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HADHBP55084 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HADHBP55084 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HADHBP55084 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HADHBP55084 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HADHBP55084 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
HADHBP55084 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HADHBP55084 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HADHBP55084 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.54■□□□□ 0.4
HADHBP55084 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.54■□□□□ 0.4
HADHBP55084 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HADHBP55084 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.54■□□□□ 0.4
HADHBP55084 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HADHBP55084 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HADHBP55084 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.54■□□□□ 0.4
HADHBP55084 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.54■□□□□ 0.4
HADHBP55084 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.54■□□□□ 0.4
HADHBP55084 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.54■□□□□ 0.4
HADHBP55084 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.54■□□□□ 0.4
HADHBP55084 AC008667.4-201ENST00000607370 168 ntBASIC17.54■□□□□ 0.4
HADHBP55084 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.54■□□□□ 0.4
HADHBP55084 AC020765.3-201ENST00000613051 740 ntBASIC17.54■□□□□ 0.4
HADHBP55084 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.54■□□□□ 0.4
HADHBP55084 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.54■□□□□ 0.4
HADHBP55084 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.54■□□□□ 0.4
HADHBP55084 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.54■□□□□ 0.4
HADHBP55084 AL139384.1-201ENST00000612143 3047 ntBASIC17.54■□□□□ 0.4
HADHBP55084 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HADHBP55084 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HADHBP55084 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HADHBP55084 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HADHBP55084 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
HADHBP55084 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.54■□□□□ 0.4
HADHBP55084 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HADHBP55084 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHBP55084 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.53■□□□□ 0.4
HADHBP55084 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.53■□□□□ 0.4
HADHBP55084 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.53■□□□□ 0.4
HADHBP55084 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHBP55084 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HADHBP55084 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHBP55084 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.53■□□□□ 0.4
HADHBP55084 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHBP55084 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.53■□□□□ 0.4
HADHBP55084 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
HADHBP55084 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.53■□□□□ 0.4
HADHBP55084 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HADHBP55084 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHBP55084 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHBP55084 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.53■□□□□ 0.4
HADHBP55084 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.53■□□□□ 0.4
HADHBP55084 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.53■□□□□ 0.4
HADHBP55084 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHBP55084 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
HADHBP55084 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHBP55084 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HADHBP55084 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHBP55084 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHBP55084 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HADHBP55084 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.53■□□□□ 0.4
HADHBP55084 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HADHBP55084 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.53■□□□□ 0.4
HADHBP55084 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.52■□□□□ 0.4
HADHBP55084 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.52■□□□□ 0.4
HADHBP55084 REXO1L8P-201ENST00000604378 1897 ntBASIC17.52■□□□□ 0.4
HADHBP55084 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.52■□□□□ 0.4
HADHBP55084 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HADHBP55084 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.52■□□□□ 0.4
HADHBP55084 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.52■□□□□ 0.4
HADHBP55084 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.52■□□□□ 0.4
HADHBP55084 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
HADHBP55084 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HADHBP55084 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HADHBP55084 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.52■□□□□ 0.4
HADHBP55084 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.52■□□□□ 0.4
HADHBP55084 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.52■□□□□ 0.4
HADHBP55084 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.52■□□□□ 0.4
HADHBP55084 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.52■□□□□ 0.4
HADHBP55084 AC008894.3-201ENST00000624324 3103 ntBASIC17.52■□□□□ 0.4
HADHBP55084 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HADHBP55084 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HADHBP55084 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HADHBP55084 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HADHBP55084 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HADHBP55084 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms